Gene lpp0006 details

Gene Information

• Locus tag: lpp0006
• Symbol: speA
• ID: 3116607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 7864
• End bp: 9756
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637578706
• Product: arginine decarboxylase
• Protein accession: YP_122358
• Protein GI: 54295989
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATA ATACTCTATC AGATGACAAT CTTTACAACA TAGAAAATTG GGGTGAGGGA 
TACTTCCGAA TTAACTCCAA GGGAAATATT GAAATCAGTA AAAAACCCGG CAAGCCGGGT 
GTTGAACTGC AAACTATAGT TGATGCAGCT GACCGTGCTG GCTTGCATTT GCCTTTATTG 
ATCCGTTGTA GTGATATTCT TCATGATAGA GTCCATAGAA TATACCAGGC GTTCACCCAG 
GCTCGAGAAG ACACTTATTA TGCCGGTAAT TATCAGCTGG TTTATCCAAT TAAAGTAAAC 
CAGGAACAAA GTGTGGTACG GGAATTGTTA AAATCGCCTG ATAATCAGAT AGGTCTGGAG 
GCTGGCAGCA AACCTGAATT GATGGCGGTT ATAGGTATGC TGGGTGACCA TCAGAGTACT 
ATAGTTTGCA ACGGCTATAA AGACACAAGT TATATTCGTA CAGCGCTTAT TGCTCAACAA 
ATGGGTCATA AGGTTTTTAT TGTTATTGAA AAAAAATCTG AGTTGGACAT TATTTTAAAG 
GAATCTGCAC GCCTTCAAAT CAAACCGACA TTAGGTGTGC GCATTCGGCT GGTCAGCAAG 
AGTGCTGGCA AGTGGGAAAA TACCGGCGGG GTTAAATCAA AATTTGGACT AAATGCCAAA 
CAGGTACTTG AACTGATTTT ACAATTAAAA GCCAATGATA TGCTGGATTG TTTGCAGCTA 
ATGCACTGCC ATTTAGGTTC ACAAATTGCC AACATCCATG ACATACGCCA TTGCATGCAA 
GAAGTGGCGA GATACTATAT TGAGCTACGT CAACTCAATG CTCCGATAAG TACCATCGAT 
GTGGGTGGAG GTTTGAGTGT CGATTATGAG GGGACTCGAT CCAATAAAGG ATGCTCAATG 
AACTACAGTC TTGTTGAATA TGCTACTCAC ATCATGTTGG CTTTAAAACA CTTATGTCAA 
GAAGCTGAGA TACCAGAGCC TGATCTTATC TCCGAATCAG GACGAGCATT AACAGCTCAT 
CATGCTGTAT TAGTTTCTAA TATTACGGAT GTAGAGATCA TCAATAAAGC GCCTGTTCTT 
CCTGAAATAT CGGAAGATGA TTCGCATGTT ATTCGAGATA TTTATGATAC TTATCAAGCC 
ATAACAGACA GCTCGCCCAC TGAAATATAT AATTACGCAG CTCATTCGCT TAATGAAGCG 
CATTCTCTTT TCAAGCATGG GGTAATTAGC CTACAGGAAA AGGCCAAGGT AGAGGCTTTT 
TATACTAATA TTTGTATGGA AATAAAAGAT AAACTGGATG AAGAAAATCC AAGTGAAAAA 
GCTTTGCTAA TGAGAATCAA TGAATGCATG GCTGCCAAGA TATTTTGTAA TATCTCTTTT 
TTCCAATCTA TACCTGATGC TTGGGCTATT GGTCAGATTT TCCCGGTAGC CCCTATCTCT 
CAGCTTAATA GAACACTAAG TATGCATAGT ATCCTACAGG ATTTAACCTG CGATTCAGAT 
GGAACAATTA AGCAATACCC TGGAAGTTCC TGCGTTACAA CCACATTGAT GCTCCCTTCA 
TACGATATCA ACAACCCTTA TAACATCGGA TTTTTCCTGG TTGGTGCCTA TCAGGAAATA 
TTGGGTAATC TGCATAACTT GTTTGGAGAT ACCAATTCTC TAGATGTAAA ACTTTCTGAT 
GATGGACAAT TTGAGCTGGA TGATTTAGTC AGCGGCGACA CCGTAACAAA CGTGTTGAAT 
TTAGCCCATT TCGATACCAA AAAGTTAATT CAATCTTATG AAAAGCAATT AATAAAATCT 
GAACTTCCTA AGGAGAAGGC ACTTTCTTAC TTAAATGAAT TAAGAAGTAT TTTTTCTCAA 
TTAACTTACC TTGATGGAAA TATTGCACAG TGA 

 

Protein sequence

MNNNTLSDDN LYNIENWGEG YFRINSKGNI EISKKPGKPG VELQTIVDAA DRAGLHLPLL 
IRCSDILHDR VHRIYQAFTQ AREDTYYAGN YQLVYPIKVN QEQSVVRELL KSPDNQIGLE 
AGSKPELMAV IGMLGDHQST IVCNGYKDTS YIRTALIAQQ MGHKVFIVIE KKSELDIILK 
ESARLQIKPT LGVRIRLVSK SAGKWENTGG VKSKFGLNAK QVLELILQLK ANDMLDCLQL 
MHCHLGSQIA NIHDIRHCMQ EVARYYIELR QLNAPISTID VGGGLSVDYE GTRSNKGCSM 
NYSLVEYATH IMLALKHLCQ EAEIPEPDLI SESGRALTAH HAVLVSNITD VEIINKAPVL 
PEISEDDSHV IRDIYDTYQA ITDSSPTEIY NYAAHSLNEA HSLFKHGVIS LQEKAKVEAF 
YTNICMEIKD KLDEENPSEK ALLMRINECM AAKIFCNISF FQSIPDAWAI GQIFPVAPIS 
QLNRTLSMHS ILQDLTCDSD GTIKQYPGSS CVTTTLMLPS YDINNPYNIG FFLVGAYQEI 
LGNLHNLFGD TNSLDVKLSD DGQFELDDLV SGDTVTNVLN LAHFDTKKLI QSYEKQLIKS 
ELPKEKALSY LNELRSIFSQ LTYLDGNIAQ