Gene BMAA1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1713 
SymbolmetZ 
ID3087914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand- 
Start bp1872094 
End bp1873284 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content67% 
IMG OID637565590 
ProductO-succinylhomoserine sulfhydrylase 
Protein accessionYP_106276 
Protein GI53716184 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.292156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACT CTCTCAACTT CGACACGCTC GCCGTCCGCT CGGGCACGCT GCGCAGTGAA 
TTCAACGAGC ATTCGGAAGC GCTCTTCCTC ACGTCGAGCT TCTGCTACGC GAGCGCGGCC 
GAGGCGGCCG AGCGCTTCAA GCATTCGGAA GACTACTACA CGTACTCGCG CTTCACGAAT 
CCGACCGTCA CGATGTTCCA GGATCGCCTC GCGGCGCTCG AGGGCGGCGA GGCGTGCATC 
GCGACCGCGT CCGGAATGGC GGCGATCACG TCGGTCGTGA TGGCCGCGCT GCAGGTGGGC 
GATCACCTCG TCAGCTCGCG CAGCCTGTTC GGCTCGACGC TCGGGCTGTT CGGGCAGATC 
TTCGCGAAGT TCGGCATCGA GACGACGTTC GTCGATCCGG CCGATCTCGA CGCATGGCGC 
GCCGCCGTGC GCCCCGAGAC GAAGATGTTC TTCCTCGAGA CGCCGTCGAA CCCGATGACC 
GAGCTCGCCG ACATCGAGGC GGTGGGCAGG ATCGCGAAGG CGGCCCATGC GCTGTTCGTC 
GTCGACAACT GTTTCTGCAG CCCGGTGCTG CAGCAGCCGC TCAAGCTCGG CGCGGACGTC 
GTGATGCATT CGGCCACCAA GTTCCTCGAC GGTCAGGGGC GCGTGCTCGG CGGCGCGCTC 
GTCGGCTCGA AGGCGTTCAT CATGGAGAAG GTGTTCCCGT TCGTGCGCAC CGCGGGGCCG 
ACGCTGTCCG CGTTCAATGC GTGGGTGCTG CTCAAGGGCA TGGAGACGCT GTCGCTGCGC 
GTGAACCGGC AATCGGAGAA CGCGCTTGAG ATCGCCCGCT GGCTCGAGGC GCATCCGGCC 
GTGAAGCGCG TGTTCTATCC GGGGCTCGAA TCGCATCCGC AGCATGCGCT CGCGAAGCGC 
CAGCAGAAAT CGGGCGGCTC GGTCGTGTCG TTCGAGCTGA ACGGCGATAC GCCGGAGCGG 
CAGCGCGCGA ACGCGTGGCG TGTGATCGAC GGCACGAAGA TCGTATCGAT CACCGCGAAC 
CTCGGCGACA CGCGCACGAC GATCACGCAT CCGGCGACGA CGACGCACAG CCGGATCGCG 
CCTGAAGCGC GCGAGGCGGC GGGGATCACC GAAGGGCTGA TCCGGCTCGC GGTCGGGCTC 
GAGGATCCGG CCGACATCCG CGACGATCTC GCGCGCGGGC TCGCCGGCTG A
 
Protein sequence
MDDSLNFDTL AVRSGTLRSE FNEHSEALFL TSSFCYASAA EAAERFKHSE DYYTYSRFTN 
PTVTMFQDRL AALEGGEACI ATASGMAAIT SVVMAALQVG DHLVSSRSLF GSTLGLFGQI 
FAKFGIETTF VDPADLDAWR AAVRPETKMF FLETPSNPMT ELADIEAVGR IAKAAHALFV 
VDNCFCSPVL QQPLKLGADV VMHSATKFLD GQGRVLGGAL VGSKAFIMEK VFPFVRTAGP 
TLSAFNAWVL LKGMETLSLR VNRQSENALE IARWLEAHPA VKRVFYPGLE SHPQHALAKR 
QQKSGGSVVS FELNGDTPER QRANAWRVID GTKIVSITAN LGDTRTTITH PATTTHSRIA 
PEAREAAGIT EGLIRLAVGL EDPADIRDDL ARGLAG