Gene BMAA1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1248 
Symbol 
ID3086891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1343903 
End bp1345522 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content73% 
IMG OID637565142 
Productserine metalloprotease MrpA 
Protein accessionYP_105880 
Protein GI53716828 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGTC TTTCCGGCCA TCCCGGCCCG ATCTTCCCGC CACGATTTTT CCGAATGAAC 
GACGCTCGCG CCGCACTGCG CGCGCTGGGT ACGCTCGTTC TCGCAATGCA CGGCCCGCGC
CGTGCGTGCG CGCCCGCGCG CGCACGCCGC GCGAGCTTGG CGCCCGTTCG CCTGCGCCCC
CGATGCGCGG CATGCCCGCC GTACGCCCTT TTCGCGCCCG GCCAACAATC GACAGGAGTC
CAGATGGAAG CAGACGACAG TAGCCGATTA CCGCTCGCCG GCGTGGCGCC GGGCGGCGCG
TGCGCCGCGT CGGCCGCGCC GGCGAGCGAC TCCGATTCCC CCTTGATTCA GCCGAACGCG
CGCGACGCGA TGCGGCGGGA GACGCGCGTG CGCCGATGA
 
Protein sequence
MSVLVPLAGC GGGGDGGGSG TPSAAAQPTP APAPAPAPAP APSSGSSQST NSSTSTAACP 
VTQAASTAAG ETLVTRTVSH EAPVDHLIVK LQRTAAASAS GARIMAAAND AARLDSVIQR
VMSQWSAKSG AVRSYAQNIA PTNAVQVERT MSDGAALLAL GQKMSADNAG ALAQTFAADP
DVAYAEPDRR VFARTVATDP DYAQQWNYFD PAAGINLPDA WNVTNGLPSV VTAVLDTGYR
PHPDIIANLL PGYDFISDIN TGNNGHGRGP DATDPGDWVT QQELTDPSSP FYQCASAPSN
SSWHGTQVAG IIGAAANNGI GIAGVSWYGK ILPVRVLGKC GGTTSDIADA MRWAAGIPVA
GAPTNLTPAK VINLSLGGSG PCGDTFQQAI NDVIARGTTV VVSAGNDGQA TTLDRPANCK
GVISVGATDS TGQRAWYSNF GSDITLSAPG SNILSTSNAG TTVPTTDAYG THSGTSLAAP
QVAGVASLML AVNPNLTPAQ IAQKLASTAR PSPATASCLA RAPGAGIVDA GTVVASATK