Gene BMAA1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1196 
Symbol 
ID3087716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1245586 
End bp1246557 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID637565094 
ProductLysR family transcriptional regulator 
Protein accessionYP_105843 
Protein GI53717048 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.191376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATGC TCGATAACAT GCGCCTGTTC GTGCGCGTCG TCGAAGCCGG CAGTTTCACC 
GCGGTCGCGA AGGAAATCGA CGCGACCACG GCCCAGGTGT CGCGCGCCGT TTCGAATCTC
GAAGCGCACG TGCAGACGCG CCTCCTGCAC CGCACGACCC GTCACCTCGG GTTGACCGAG
AGCGGCCAGC GCTACTTCGA GCGCGCGAAG TCGATCCTCG CGGAGATCGA CTATGCGAAC
GCCGAGGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGC TGCGCATCCA TGCGATGACG
GGGCTCGGGC AGAGCCACGT GGTGTCGTCG ATCGTCCGCT ATCAGGAAGA CAATCCGGAC
GTGTCGGTCG AGCTCACGCT CGCGCAGCGC ATGCCGAATC TCGTCGAGGA GGGCTACGAC
GTGTCGATCG TGTCGGCGTC GCATCTGCCC GATTCGGGCT ATGTCGCGCA GACCTGCGGG
ACGAGCTGCA GCGTGCTCGT CGCGTCGCGC GAGTATCTCG CCCGGCACGG CACGCCGACC
ACGCCCGACG ATCTCGCGAA GCACGTGTGC CTGCGGCTCG ACACGCCGGC CTCGCCGGGC
GGCGAGTGGC GGCTCGAGCG CGACGACGGC GACGAGACCG TCTACGCGCT GCCGCCCGCG
CCGTTCCAGG CGAACGTGCC GGATGCGTTG TCGGTGGCGG TGCGCGCGGG CCGCGGGATC
GGCTCGATCG CGCTGTACAC GGCGCTCGAC GACATCCGCG AAGGGCGGCT CGTGCGCGTG
CTGCCGAACT ACCGGCTCGA TACGCTGAGC GTGTACGCGG TCTATGCGAC GCGCCGCTAT
CTCGACGCGA AGATCCGCAC GTTCCTCGAC CATCTGCGCA CGACGCTCGC GCCCGCGCTC
GAAAACGATC TGAAGGAGCT CAACCGGCTG AACGGCGGCG TGGGGAAGAA GGCGCTGCGC
GAGGTCGCGT AG
 
Protein sequence
MDMLDNMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE 
SGQRYFERAK SILAEIDYAN AEARNALLRP SGKLRIHAMT GLGQSHVVSS IVRYQEDNPD
VSVELTLAQR MPNLVEEGYD VSIVSASHLP DSGYVAQTCG TSCSVLVASR EYLARHGTPT
TPDDLAKHVC LRLDTPASPG GEWRLERDDG DETVYALPPA PFQANVPDAL SVAVRAGRGI
GSIALYTALD DIREGRLVRV LPNYRLDTLS VYAVYATRRY LDAKIRTFLD HLRTTLAPAL
ENDLKELNRL NGGVGKKALR EVA