Gene BMAA1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1195 
Symbol 
ID3087720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp1243979 
End bp1245064 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content71% 
IMG OID637565093 
Productcalcium/proton exchanger 
Protein accessionYP_105842 
Protein GI53717047 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.542311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCT CTTCGTCCGC CCTGCCGCGC TGGACGCTCG TCGCCCCGCT CGCCGCCTGG 
CTGGTGCTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCT TCGCCATCGC ATTCGTCGCC 
GCCGCGCTCG CGGGCGCGGT GTTCTCCGCG GTGCATCACG CCGAAGTCGT CGCGCACCGC 
GTCGGCGAGC CGTTCGGCAC GCTCGTGCTC GCGATCGCCG TCACCGTGAT CGAGGTCGCG 
CTGATCGTCT CGGTGATGCT GTCGGCCGGC CCCGAGAAAG CGGGGCTCGC GCGCGACACC 
GTGTTCGCCG CGGTGATGAT CGTCTGCAAC GGGATCGTCG GGCTGTGCCT GCTCGTCGGC 
GGCTGGCGGC ACGGCGAGCA GGACTTCCAG GGGCGCGGCG CGGCGAAGGC GCTCGCGGTG 
CTCGCGTCGC TGTCGGTGCT CTCGCTCGTG ATGCCGAACT ATCTGAGCGC CGCGCCGGGC 
CCACGGCTGT CGACGTCGCA GCTCGCGTTC GCGGGCGTGT CCTCGCTCGT GCTGTACGGC 
GTGTTCGTGT TCGTGCAGAC GGTTCGCCAT CGCGATTACT TCCTGATCGA CGGCAGCGCC 
GACGAATCCG TCCATGCGGT GCCGCCGAGC GGCCGCACCG CGCTCACGAG CATCGCGTTC 
CTGTTCGTGA GCCTCGTCGC GGTCGTGCTG CTCGCGAAGC TGCTGTCGCC CGCCGTCGAG 
CGCACGGTGC TGCGGCTCGG CGCGCCCGAG GCGGCCGTCG GCATCGTGAT CGCCGCGCTC 
GTGCTGCTGC CGGAAGGGCT CGCCGCCGTC GGCGCGGCGC GCGCGAACCG GCTACAGACG 
AGCATGAACC TCGCGCTCGG CTCGGCGCTC GCGAGCATCG GCCTGACGAT TCCGACCGTC 
GCCGCCGTGT TCATCTGGAC GGGCGCGCCG CTCACGCTCG GCATCGGCGC AATGGAGACG 
GTGCTGCTGT CGCTCACGCT GCTCGTCAGC ACGCTCACGC TCAGCCTGGG ACGCACGACG 
GTGCTGCACG GCGTCGTGCA TCTGTCGCTG TTCGCCGCCT ATCTGTTCCT GTCGATCACG 
CACTGA
 
Protein sequence
MPISSSALPR WTLVAPLAAW LVLALSRVVP AEGFAIAFVA AALAGAVFSA VHHAEVVAHR 
VGEPFGTLVL AIAVTVIEVA LIVSVMLSAG PEKAGLARDT VFAAVMIVCN GIVGLCLLVG 
GWRHGEQDFQ GRGAAKALAV LASLSVLSLV MPNYLSAAPG PRLSTSQLAF AGVSSLVLYG 
VFVFVQTVRH RDYFLIDGSA DESVHAVPPS GRTALTSIAF LFVSLVAVVL LAKLLSPAVE 
RTVLRLGAPE AAVGIVIAAL VLLPEGLAAV GAARANRLQT SMNLALGSAL ASIGLTIPTV 
AAVFIWTGAP LTLGIGAMET VLLSLTLLVS TLTLSLGRTT VLHGVVHLSL FAAYLFLSIT 
H