Gene BMAA0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0567 
Symbol 
ID3085945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp577172 
End bp578122 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content64% 
IMG OID637564484 
Productglycine betaine/L-proline ABC transporter, periplasmic glycine betaine/L-proline-binding protein 
Protein accessionYP_105328 
Protein GI53717244 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.517451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA ATCTGATCGC GGCGGCCTGC GGGCTCGCCA TCGCGGCCGC GCCGTTCGCG 
AGCGCCCGGG CGGGCGATGC GCCGACCTGC AAGGCGGTGC GCTTTGCGGA TGTCGGCTGG 
ACCGACATCG CCGCGACGAC GGGGCTCGCG TCGACGATGC TCGCCGGGCT CGGCTATGCG 
CCGACGAAGA CGATCGCTTC GGTGCCGATC ACGTTCGCGG GGATCAAGAG CAAGCAGATC 
GACGTGTTTC TCGGCTACTG GTCGCCGACG ATGGACCCGA TGATCGCGCC GTTCACGAAG 
GCGGGCACGA TCAAGGTGCT CGCCGCGCCG AATCTGACGG GCGCGAAGTA CACGCTCGCC 
GTGCCCGATT ACGTGTATCA GGGCGGCCTG AAATCGTTCG CCGACATCCA GAAATACGCG 
GACAAGCTCA ACGGCAGGAT CTACGGGATC GAGCCCGGCA ACGACGGCAA CGCGCTCATC 
AAGAAGATGA TCGACGGCAA CCAGTTCGGC CTCGGCAAGT TCAAGCTCGT CGAATCGAGC 
GAGGCGGGGA TGCTCGTCGA GGTGAACCGC GCGATCCGCG ACAAGCAGTG GATCGTGTTC 
CTCGGCTGGG AGCCGCATCC GATGAACGTG CAGATGAAGA TCGATTACCT GAGCGGCGGC 
GACGACGTGT TCGGCCCGAA CTACGGCGAG GCGAAGGTGC TGACCGCCAC GCCGCCCGAT 
TACGCGGCGC GTTGCCCGAA CGTCGCGAAG TTCGTGTCGA ACCTGCAGTT CACGACATCG 
ATCGAGAACC ATGTGATGCT GCCGATCATG AACAAGGAAG ACCCGAACAA GGCGGCGGCC 
GAATGGCTGA AGGCGAATCC GCAGTCGCTC GACAAGTGGC TCGCCGGCGT GACGACGTTC 
GACGGCAAGC CGGGGCTGCC GGCCGTCAAG CACTACCTCG GCATTCAGTA A
 
Protein sequence
MKRNLIAAAC GLAIAAAPFA SARAGDAPTC KAVRFADVGW TDIAATTGLA STMLAGLGYA 
PTKTIASVPI TFAGIKSKQI DVFLGYWSPT MDPMIAPFTK AGTIKVLAAP NLTGAKYTLA 
VPDYVYQGGL KSFADIQKYA DKLNGRIYGI EPGNDGNALI KKMIDGNQFG LGKFKLVESS 
EAGMLVEVNR AIRDKQWIVF LGWEPHPMNV QMKIDYLSGG DDVFGPNYGE AKVLTATPPD 
YAARCPNVAK FVSNLQFTTS IENHVMLPIM NKEDPNKAAA EWLKANPQSL DKWLAGVTTF 
DGKPGLPAVK HYLGIQ