Gene BMAA0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0440 
Symbol 
ID3087105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp436215 
End bp436742 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID637564361 
Producthypothetical protein 
Protein accessionYP_338352 
Protein GI77358921 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATG CTTTGGTTGA TTACTTCTTG CAGATCGATG GCGTCGAGGG TGAGTCGACC 
GATCAGCAAT ATCCCGGTCT GATCCAGATC CAGAGCTGGC AGTGGGCGGA AGAGAACTCG
GGCCGCTGGG GCTTCGGCAG CGGCGGCGGC GCGGGCAAGG TCGAGATGAA GGACTTCGAG
TTCCGCATGG TGTCGAACAA GGCGTCGCCG AAGCTGTTCC TGATGTGCGC GACGGGTGAG
CACATCCAGA ATGCGAAGCT GATCTGCCGC AAGTCGGGCA AGGGCCAGCA GGAGTTCCTG
ACGATCTCGT TCGCGAGCGG CCTCGTGTCG TCGTTCCGCA CGCTCGGCAA CATGCCGATC
TCGCAGCTCG GTCACGCGAG CGGCGAAGTC GACGGCGTGC TGCCGACGGA TCAGATCCGC
ATCAACTTCG TCCAGATCGA GTTCGAGTAC CGCGAGCAGC GCAACGACGG CACGATGGGC
GCCGTGATCA AGGCGGGCTA CGACCTGAAG CAGAACGCGC CGATCTAA
 
Protein sequence
MANALVDYFL QIDGVEGEST DQQYPGLIQI QSWQWAEENS GRWGFGSGGG AGKVEMKDFE 
FRMVSNKASP KLFLMCATGE HIQNAKLICR KSGKGQQEFL TISFASGLVS SFRTLGNMPI
SQLGHASGEV DGVLPTDQIR INFVQIEFEY REQRNDGTMG AVIKAGYDLK QNAPI