Gene BMAA0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0405 
Symbol 
ID3086832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp397744 
End bp398235 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID637564329 
Producthypothetical protein 
Protein accessionYP_338345 
Protein GI77358941 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.961093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTCG CAATGTTTAT GAAAGTGGAC GGCGTCACCG GCGAATCGGC CGACGCGCAG 
CACAAGGGCT GGACCGACAT CCAGTCGTTC TCATGGGGCG CGAGCCAGCC GGGCGCGATG
GCGAGCGGCA GCGGCGGCAA CGCGGGCAAG GCGAGCTTCA ACGATCTCGT CGTCGCCGCG
TACATGGACA AGGGCGCAAC GGCGATCATC AAGAACTGCG CGAGCGGCAA GCACCTGCCG
ACGGTCGAGA TATCGGCGTG CAAGACGGGC GGCTCGCAGA TCGAGTTCAT GCGCGTGACG
CTGCAGGAAG TGCTCGTCAC GTCCGCGCAG ATCGCGGGCG TGGACCCGGG CGACGCGGCC
GACCGGCTGA TGATGCAGTA CGGTTTTCAG GCCGCGAAGG TCAAGAAGCA GTACTGGCAG
CAGAACGACA ACGGCGGCAA GGGCGCCGAA GTGTCGGTCG GCTGGAACAT CAAGGAGAAC
ACCGAGATGT GA
 
Protein sequence
MGVAMFMKVD GVTGESADAQ HKGWTDIQSF SWGASQPGAM ASGSGGNAGK ASFNDLVVAA 
YMDKGATAII KNCASGKHLP TVEISACKTG GSQIEFMRVT LQEVLVTSAQ IAGVDPGDAA
DRLMMQYGFQ AAKVKKQYWQ QNDNGGKGAE VSVGWNIKEN TEM