Gene BMAA0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0396 
Symbol 
ID3087995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp383787 
End bp384326 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID637564320 
Productputative lipoprotein 
Protein accessionYP_105192 
Protein GI53716351 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0891925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGAA AGAGACCGAA AATGCGACCG CGGTTCAGTG TTTCCGTCGT TCTGGGATGC 
GCGCTGCTGC TTGCCGGATG CGGGGCGACC GAGCGTTCCG TTGCGGTGCC GTATTCGATC
ACGCTCGACG TCGCGCCCGA CGTCAATCCG GACCTCAATC GCAAGCCGTC GCCGATCGTG
CTGAAGGTGT TCCAGCTGAA GACGGCGTCC GCGTTCGAAA GCGCCGATTT CTTCTCGCTG
CAGGACAAGC CGCAGAGCGT GCTCGGCGCG GATCTGCTCG GCGTCGACCG GATCATCCTG
CGCCCGGGGG ATGCGCGCAC GCTGCACTAT CGCGGCAACG TCGACGCGGG CGCGATCGGC
ATCGTCGCCG AATATCGCGT GCTCGAGAAG AACCGCTGGC GGATGACGGT GCCGCTGCCG
CGCGCGAAGC AACTGAACCT GTACCGATTC TGGCAAACCT CGCCGGGCGA GATGAAGCTG
CAGGTCGCCG TGAAGAACGG CGGCATCGGC CTCGGCGGCG ATTCGCGAGT ACGCCAATGA
 
Protein sequence
MQGKRPKMRP RFSVSVVLGC ALLLAGCGAT ERSVAVPYSI TLDVAPDVNP DLNRKPSPIV 
LKVFQLKTAS AFESADFFSL QDKPQSVLGA DLLGVDRIIL RPGDARTLHY RGNVDAGAIG
IVAEYRVLEK NRWRMTVPLP RAKQLNLYRF WQTSPGEMKL QVAVKNGGIG LGGDSRVRQ