Gene BMA3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA3317 
Symbolcca 
ID3090437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp3429614 
End bp3430855 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID637563867 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_104787 
Protein GI53724555 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT ACGCGGTGGG CGGCGCGATC CGCGATGCAC TGCTCGGCCT GCCGGTGCGC 
GACCGCGATT ACGTCGTCGT CGGCGCGACG CCCGAGCAGA TGGCCGCGCA GCGCTTCAGG
CCGGTCGGCA AGGATTTTCC GGTGTTCCTG CATCCGGATA CGCACGAGGA ATACGCGCTC
GCGCGCACCG AACGCAAGAC GGCGGCCGGC TATCACGGCT TCCAGTTCTA TTACGCGCCC
GACGTCACGC TCGAGCAGGA TCTCGTGCGG CGCGACCTGA CGATCAACGC GATGGCGCGC
GAAGTGAGCC CGGACGGCGC GCTCGTCGGG CCGGTCGTCG ATCCGTTCGG CGGGCAGGCG
GATTTGCGCG CGAAGCTGTT CCGGCACGTC GGCGACGCGT TCGTCGAGGA TCCGGTGCGC
ATCCTGCGCG TCGCGCGCTT CGCCGCGCGC TTCGCCGAGT TCGCCGTCGC GCCCGACACG
GCCGCGCTGA TGCGCGCGAT GGTCGACGCG GGCGAGGTCG ACGCGCTCGT GCCCGAGCGC
GTGTGGCAGG AGCTCGCGCG CGGGCTGATG GAGGCGAAGC CGTCGCGGAT GTTCGCGGTG
CTGCGCGAGT GCGGCGCGCT CGCACGGATC CTGCCCGAGA TCGACGCGCT CTTCGGCGTG
CCGCAGCGCG CCGACTATCA CCCGGAGGTC GACACGGGCG TGCACGTGAT GATGGTGATC
GATCACGCGG CGAAGCAGGG CTACTCGCTG CCGGTGCGTT TCGCGGCGCT CACGCACGAC
CTCGGCAAGG CGACGACGCC CGCCGACGTG CTGCCGCGTC ACATCGGCCA CGAGGGGCGC
AGCGTCGATC TGCTGAAGCC GCTGTGCGAG CGGCTGCGGG TGCCGAACGA GTGCCGCGAT
CTGGCGCTCG TCGTCGCGCG CGAGCACGGC AATCTGCATC GCGTGATGGA GATGGGCGCG
GCCGCGCTGG TGCGCCTGCT CGAGCGCGCG GATGCGCTGC GCAAGCCGGC GCGCTTCGCC
GAGGCGCTGC AGGCGAGCGA GGCCGACGCG CGCGGCCGGC TCGGCCTCGA GACGAAGCCC
TATCCGCAGG CCGAACGGCT GCGGCAGGCG CTCGTCGCCG CGCGCGCGGT CGATGCGGGC
GCGATCGCGC AGGGGCTCGC GGGCGAGCCC GCGAAGATCA AGGATGCGGT GCACCGGGCG
CGCGTGCGCG CGGTCGCGCA GGCGGTTGGC GTGGCCGATT GA
 
Protein sequence
MKIYAVGGAI RDALLGLPVR DRDYVVVGAT PEQMAAQRFR PVGKDFPVFL HPDTHEEYAL 
ARTERKTAAG YHGFQFYYAP DVTLEQDLVR RDLTINAMAR EVSPDGALVG PVVDPFGGQA
DLRAKLFRHV GDAFVEDPVR ILRVARFAAR FAEFAVAPDT AALMRAMVDA GEVDALVPER
VWQELARGLM EAKPSRMFAV LRECGALARI LPEIDALFGV PQRADYHPEV DTGVHVMMVI
DHAAKQGYSL PVRFAALTHD LGKATTPADV LPRHIGHEGR SVDLLKPLCE RLRVPNECRD
LALVVAREHG NLHRVMEMGA AALVRLLERA DALRKPARFA EALQASEADA RGRLGLETKP
YPQAERLRQA LVAARAVDAG AIAQGLAGEP AKIKDAVHRA RVRAVAQAVG VAD