Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA2989 |
Symbol | |
ID | 3088553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 3090370 |
End bp | 3092073 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637563570 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_104492 |
Protein GI | 53724393 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGATTT CCCCGGACCG CGAGCAGCGC GCCACCACCG GCGCGCGCCT GCTCGTCGAC GCCCTGCTCG CGAATCACGT CGAGCGCGTG TTCTGCGTGC CCGGCGAGAG CTTCCTCGCC GTGCTCGATT CCCTCGCCGA CGAAACCGAA CGCATCCGCA CCATCGTCTG CCGGCACGAA GCCGCGGCCG CGAACATGGC GGAAGCCGTC GGCAAGCTGA CCGGCCGGCC CGGCATCGCG TTCGCCACGC GCGGGCCCGG CGCGACGCAC GCGTCGATCG GCGTGCACAC CGCGTTTCAG GATTCGACGC CGATGATCCT CTTCATCGGC CAGTGCGCGC GCGAGCATCT CGATCGGGAA GCGTTCCAGG AGATCGACTA TCGGCGCATG TTCGGCCAGC TCGCGAAATG GGTTGCGCAG ATCGACGATC CGCGCCGCAT TCCCGAATAC CTGAGCCATG CGTTCCACGT CGCGATGTCG GGCCGGCCGG GCCCCGTCGT GCTCGCGCTG CCCGAGGACG TGCTGTCCGA GCCGTGCGCG GCGCAGCCCG TCGCGCCCGC GGCCAGGCGC GTCGCCGCCG CGCCGTCCGC CGCGCAGATG AGCGAGCTGC GCGAGCGGCT CGCGCGTGCG CAGCGCCCGC TCGTGCTCGC GGGCGGCAGC GGCTGGACGC CCGGCGCGTG CGCGGATCTG CGCACGTTCG TCGAACGCTG GCAGTTGCCG ATCGCGTGCG CATTCCGCTA TCAGGACACG TTCGACAACG CGCATCCGCA GTACGCGGGC GACGTCGGCC TCGGTGTGAA CCCCGAGCTC GCGCGCCGCA TCCGCGAAGC GGACCTGCTG TTCGCGCTCG GCCCGCGCCT CGGCGAAGCG ACGACGGGCG GCTATACGCT GATCGACATT CCGAGGCCGA AGCAGGTGCT CATTCATGTG CATCAAGGCG CGGACGAGCT GGGGCGCGTC TACGCGGCCG ATCTGCCGAT CGCCTCCGGC ATGCCCGAGA TCGCCGCGCA GCTCGCCGCG CTCGAACCGC CCGCGTCGCT CGCGTGGGCG GGCAGCGCCG CCGACGCGCA TCGCGCCTAC CTCGACTGGC ACGCGCCCCG GCCGATGCCG GGCGAGGTGC AGCTCGGCGA CGTGATGCGG CAATTGCGCG AGCGGCTGCC GCACGACGCG ATCGTGACGA ACGGCGCCGG CAACTACGCG GCGTGGCTGC ACCGCCATTT CGCTTATCGG CACTTCCGCT CGCAGCTCGC GCCGACGAGC GGCGCGATGG GCTACGGCGT GCCGGCCGCG CTCGCCGCGA AGTCGCTGTA TCCGCAGCGC ACGGTGGTCG CGCTCGCGGG CGACGGCTGC TTCATGATGG CCGGCAACGA ACTCGCGACG GCGATCCAGT ACGGGCTCGC GATCATCGTG CTCGTCGTGA ACAACGGCCA CTTCGGCACG ATCCGCATGC ATCAGGAACG CCATTACCCC GGCCGCGTGC ACGGCACCGG GCTCACGAAC CCGGATTTCG CCGCCTATGC GCGCGCGTTC GGCGCGCACG GCGAGACGGT CGAGCGCACC GCCGATTTCC TGCCCGCGCT CGAACGCGCG CTCGCGAGCG GCGCGCCCGC GCTGATCGAG ATCCGCGTGC CGCAGGACGC GTGCACGCCC GCCGCGACGC TCGAGCAGGT GCGCGAGCAA GGGCTGCGCG CGCGTCGCGC TTGA
|
Protein sequence | MSISPDREQR ATTGARLLVD ALLANHVERV FCVPGESFLA VLDSLADETE RIRTIVCRHE AAAANMAEAV GKLTGRPGIA FATRGPGATH ASIGVHTAFQ DSTPMILFIG QCAREHLDRE AFQEIDYRRM FGQLAKWVAQ IDDPRRIPEY LSHAFHVAMS GRPGPVVLAL PEDVLSEPCA AQPVAPAARR VAAAPSAAQM SELRERLARA QRPLVLAGGS GWTPGACADL RTFVERWQLP IACAFRYQDT FDNAHPQYAG DVGLGVNPEL ARRIREADLL FALGPRLGEA TTGGYTLIDI PRPKQVLIHV HQGADELGRV YAADLPIASG MPEIAAQLAA LEPPASLAWA GSAADAHRAY LDWHAPRPMP GEVQLGDVMR QLRERLPHDA IVTNGAGNYA AWLHRHFAYR HFRSQLAPTS GAMGYGVPAA LAAKSLYPQR TVVALAGDGC FMMAGNELAT AIQYGLAIIV LVVNNGHFGT IRMHQERHYP GRVHGTGLTN PDFAAYARAF GAHGETVERT ADFLPALERA LASGAPALIE IRVPQDACTP AATLEQVREQ GLRARRA
|
| |