| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA2976 |
|---|
| Symbol | cadA |
|---|
| ID | 3088481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | + |
|---|
| Start bp | 3073365 |
|---|
| End bp | 3075506 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637563557 |
|---|
| Product | cadmium-translocating P-type ATPase |
|---|
| Protein accession | YP_104479 |
|---|
| Protein GI | 53724032 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTCGG CGTTCCGGAT CATGCAGATG GACTGCCCGA CCGAGGAGAC ACTGATCCGC
AAGAAGCTGG GCGCGATGTC CGAAGTCGCG GCGCTCGAAT TCAACCTGAT GCAGCGGATG
CTCGCGGTCG AGCACGTGCC GGGCGCGGAA GCCGGCATCG CCGCCGCGAT CCGCTCGCTC
GGCATGACGC CCGAACAGGC GGACGCCGGC GCGTCGGGCC GTGGCGCGTT GCCCGCGCCG
GCCGACGCGC CGCGCCCGTG GTGGCCGCTC GCGGTCGCGG GCGTCGCGGC GGCGGCGTCG
GAAGCGGCCA CGTGGCTGCA ACTGCCGGTA TGGCTCGCCG CCGCGCTCGC GCTCGCCGCG
GTCGCGACCT GCGGCCTCGG CACGTATCGC AAGGGCTGGA TCGCGCTCAC GAACGGCAAC
CTGAACATCA ACGCGCTGAT GAGCATCGCG GTGACGGGCG CGATGGCGAT TGGCCAGTGG
CCCGAGGCCG CGATGGTGAT GGTGCTCTTC ACCGTCGCCG AATTGATCGA GGCGCGCTCG
CTCGACCGTG CGCGCAACGC GATCCAGAGC CTGATGCGCC TCGCGCCCGA CACCGTGACG
CTCAGGCAGC CCGACGGCAC GTGGCAGCCG GTCGACGCCG CGCAGGTCGC GCTCGGTGCG
ATCGTGCGCG TGAAGCCCGG CGAGCGCATC GGCCTCGACG GCGAGATCGT TGCCGGCCGC
TCGACCGTCA ACCAGGCGCC GATCACGGGC GAGAGCCTGC CCGTCGAGAA AACCGAGGGC
GACGCGGTGT ACGCGGGCAC GATCAACGAA GCCGGCTCGT TCGAATATCG GGTGACGGCG
GTCGCGAGCA ACACGACGCT CGCGCGGATC ATCCATGCGG TCGAGGAGGC GCAGGGCGCG
AAGGCGCCGA CGCAGCGCTT CGTCGACAGC TTCGCGCGCG TCTACACGCC GATCGTGTTC
GCGATCGCGC TCGTCGTCGC GATCGCGCCG CCGCTCGTGC TCGACGGCGC ATGGCGCGAC
TGGATCTATC GCGCGCTCGT GCTGCTCGTG ATCGCGTGCC CATGCGCGCT CGTGATCTCG
ACGCCCGTGA CGATCGTATC GGGGCTCGCG GCGGCCGCGC GGCGCGGGAT TCTCGTGAAG
GGCGGCGTGT ACCTCGAGCA GGGGCGCCGC CTCGCGTGGC TCGCGCTCGA CAAGACGGGC
ACGATCACGC GCGGCAAGCC GGTGCAGACC GATTTCGAGA TGCGCGCAGC CGACGTCGAC
GCCGCGCTCG TGCGGGGGCT CGCCGCGAGC CTCGCCGCGC GCTCGGATCA CCCGGTTTCG
CAGGCGGTCG CGGCGGCGAG CGCGGCTCAA GCCGGCGCGG GCGGCGTCCC GCGCGCGAAG
CCCGCGTCGT TCGCCGACGT CGCCGATTTC GAGGCGATTC CCGGCCGCGG CGTGCGCGGC
AAGATCGACG GCGTGCCGTA CTGGCTCGGC AATCATCGCC TCGTCGAGGA GCTCGACTGC
TGCACGAGCG CGCTCGAAGC GCGTCTCGAC GAGCTCGAGC GGCAGGGCAA GACGGTCGTG
ATGCTGATCG ACGGCGCGCG CGTGCTCGGC CTCTTCGCGG TGGCCGACAC GGTGAAGGAC
ACGAGCCGCG CGGCGGTTGC CGAGCTGCAC GCGCTCGGCA TCAAGACCGC GATGCTGACG
GGCGACAACC CGCACACCGC GCAAGCGATC GCGCAGCAGG TCGGCATCGA CGACGCGCGC
GGCAACCAAC TGCCGCAGGA CAAGCTCGCC GCCGTCGAAG CGCTCGCGGC GGGCGGCCGC
GCGGTCGGCA TGGTCGGCGA CGGGATCAAC GACGCGCCGG CGCTCGCGCG CGCCGACATC
GGCTTCGCGA TGGGCGCGAT GGGCACCGAT ACCGCGATCG AGACGGCCGA CGTCGCGCTG
ATGGACGACG ACCTGCGCAA GATCCCGGCG TTCGTGCGGC TGTCGCGCGC GACGCATCGC
GTGCTCGTGC AGAACATCGC GTTCGCGCTC GCCGTGAAGG CGGTGTTCGT CGGCCTCACG
GTCGCGGGGA TGGGCACGAT GTGGATGGCG GTGTTCGCCG ACGCGGGCGC GAGCCTCATC
GTCGTCGGCA ACGGCTTGCG GCTGTTGCGC CGCGGCCAAT GA
|
|---|
| Protein sequence | MRSAFRIMQM DCPTEETLIR KKLGAMSEVA ALEFNLMQRM LAVEHVPGAE AGIAAAIRSL
GMTPEQADAG ASGRGALPAP ADAPRPWWPL AVAGVAAAAS EAATWLQLPV WLAAALALAA
VATCGLGTYR KGWIALTNGN LNINALMSIA VTGAMAIGQW PEAAMVMVLF TVAELIEARS
LDRARNAIQS LMRLAPDTVT LRQPDGTWQP VDAAQVALGA IVRVKPGERI GLDGEIVAGR
STVNQAPITG ESLPVEKTEG DAVYAGTINE AGSFEYRVTA VASNTTLARI IHAVEEAQGA
KAPTQRFVDS FARVYTPIVF AIALVVAIAP PLVLDGAWRD WIYRALVLLV IACPCALVIS
TPVTIVSGLA AAARRGILVK GGVYLEQGRR LAWLALDKTG TITRGKPVQT DFEMRAADVD
AALVRGLAAS LAARSDHPVS QAVAAASAAQ AGAGGVPRAK PASFADVADF EAIPGRGVRG
KIDGVPYWLG NHRLVEELDC CTSALEARLD ELERQGKTVV MLIDGARVLG LFAVADTVKD
TSRAAVAELH ALGIKTAMLT GDNPHTAQAI AQQVGIDDAR GNQLPQDKLA AVEALAAGGR
AVGMVGDGIN DAPALARADI GFAMGAMGTD TAIETADVAL MDDDLRKIPA FVRLSRATHR
VLVQNIAFAL AVKAVFVGLT VAGMGTMWMA VFADAGASLI VVGNGLRLLR RGQ
|
|---|
| |