Gene BMA2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA2606 
SymbolrpoA 
ID3090035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp2716106 
End bp2717083 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID637563212 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_104140 
Protein GI53723828 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCA GTTTGTTGAA ACCCAAGATC ATCGCCGTGG AATCGCTGGG CGAGAACCAC 
GCGAAGGTGG TGATGGAGCC GTTCGAACGC GGTTACGGCC ACACCTTGGG CAATGCGCTT 
CGCCGTGTGC TGCTGTCGTC GATGGTCGGT TACGCGCCGA CCGAAGTGAC GATCGCCGGC 
GTCGTGCACG AGTATTCGAC GCTCGATGGT GTGCAAGAGG ACGTCGTCAA CCTGCTGCTG 
AACCTGAAGG GCGTGGTGTT CAAGCTGCAT AACCGCGACG AAGTCACGGT GACGCTGCGC 
AAGGAAGGCG AAGGCGTCGT GACGGCCGGC GATATCGAAC TGGCCCACGA TTGCGAAGTC 
ATCAACCCGA ATCACGTGAT CGCGCATCTG TCGAAGGGCG GCAAGCTCGA CGTGCAGATC 
AAGGTGGAAA AGGGCCGGGG CTACGTACCG GGCAACGTGC GCCGCTACGG CGACGAAACG 
GCCAAGATCA TCGGCCGCAT CGTCCTCGAC GCATCGTTCT CGCCGGTTCG CCGCGTGAGC 
TACACGGTCG AGAGCGCGCG CGTCGAGCAG CGTACCGACC TCGACAAGCT CGTGATGAAC 
ATCGAAACGA GCGGCGTCAT CACGCCGGAA GAAGCGATCC GCCAGTCGGC ACGCATCCTC 
GTCGACCAGC TGTCCGTATT CGCGGCGCTG GAAGGCACGG AAACGGCCGC GGAAGCCCCG 
TCGCGCGCGC CGCAGATCGA TCCGATCCTG CTGCGCCCGG TCGACGACCT CGAGTTGACC 
GTGCGTTCGG CGAACTGCCT GAAGGCCGAG AACATCTACT ACATCGGCGA TCTGATCCAG 
CGCACGGAAA ACGAGCTGCT GAAGACGCCG AACCTCGGCC GCAAGTCGCT CAACGAGATC 
AAGGAAGTGC TCGCTTCACG CGGTCTCACG CTGGGCATGA AGCTCGAGAA CTGGCCGCCG 
GCCGGCCTCG ACAAGTAA
 
Protein sequence
MQTSLLKPKI IAVESLGENH AKVVMEPFER GYGHTLGNAL RRVLLSSMVG YAPTEVTIAG 
VVHEYSTLDG VQEDVVNLLL NLKGVVFKLH NRDEVTVTLR KEGEGVVTAG DIELAHDCEV 
INPNHVIAHL SKGGKLDVQI KVEKGRGYVP GNVRRYGDET AKIIGRIVLD ASFSPVRRVS 
YTVESARVEQ RTDLDKLVMN IETSGVITPE EAIRQSARIL VDQLSVFAAL EGTETAAEAP 
SRAPQIDPIL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTENELLKTP NLGRKSLNEI 
KEVLASRGLT LGMKLENWPP AGLDK