Gene BMA1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1928 
SymbolphaZ 
ID3090266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp2025900 
End bp2027366 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content66% 
IMG OID637562582 
Productintracellular PHB depolymerase 
Protein accessionYP_103522 
Protein GI53725506 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.216313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTACC AATTTCACGA ATTCCAGCGG GCGATGCTGA GCCCGCTGAC CGCCTGGGCA 
CAAGCCGCGT CCAAATCGTT CGCGAACCCG TCGAGTCCGC TTTCGCTCGT ACCGGGCGCG
ACGCGCCTCG CGGCGGGCTA CGAACTGCTG TACCGGCTCG GCAAGGATTA CGAAAAGCCG
GAGTTCGGGA TTCACCAGAT CGTCAAGGAC GGACACAACA TTCCGATCGT CGAGCAGACG
ATCATCGAAA AGCCGTTCTG CCGGCTGCTG CGCTTCAAGC GCTACGCGGA CGATTCGGGC
GCCGTCGGGC AACTGAAGGA CGAGCCCATC GTGCTCGTGT GCGCGCCGCT GTCGGGCCAC
CACGCCACGC TGCTGCGCGA CACGGTCCGC ACGCTGCTGC AGGACCACAA GGTCTACATC
ACCGACTGGA TCGACGCGCG GATGGTGCCC GCCGAAGTCG GCTCGTTTCA TCTCGACGAC
TACGTCGGCT ACATCCAGGA ATTCATCCGG CATATCGGCG CGCGCAACCT GCACGTGATC
TCGGTATGTC AGCCGACCGT GCCCGTGCTC GCGGCGATCT CGCTGATGGC GAGCCGCGGC
GAGGACACGC CGCTCACGAT GACGATGATG GGCGGGCCGA TCGACGCGCG CAAGAGCCCG
ACGTCGGTGA ATTCGCTCGC GACCAACCGC TCGCACTCGT GGTTCGAGAA CAACGTGATC
CACACGGTGC CGGCGAACTA TCCGGGCGAG GGTCGCAAGG TCTATCCGGG CTTCCTGCAG
CACACGGGCT TCGTCGCGAT GAACCCGGAG CGCCACGCGC AATCGCACTG GGACTTCTAC
CAGAGCCTGC TGCGCGGCGA CGAGGAAGAC GCCGAGGCAC ACCGCCGCTT CTACGACGAA
TACAACGCGG TGCTCGACAT GGCGGCCGAA TACTATCTGG ACACGATCCG CATCGTGTTC
CAGGAGTTCC GCCTCGCCGA GGGCACGTGG GACATCCACG GCGAGCGCGT GAAGCCGGCC
GATATCCATT CGACCGCGCT GATGACGATC GAGGGCGAAC TCGACGACAT CTCGGGCAGC
GGCCAGACGC ACGTCGCGCA CGAGCTGTGC ACGGGCATCG AACAGGCGCA CCGCCGCAGC
CTCACCGCCG AGAAGTGCGG CCACTACGGC ATTTTCTCGG GCCGCCGCTG GCGCACGATC
ATCTATCCGC AACTGCGCGA CTTCATCCGC GAGCACGCGT CGCAGCCGAA GAAGCCGACG
CCGCAGGCCG GTTCCACGCC CAACTCGCCT TCCACGCCGA GCCGATCGGC ATCGGGCAGC
GAAACGGCGA GCGCAGCGCC CGCGAAAGCG GCCGCGCTCA AGCTGAGCGC GAAGCGCACC
GCCGCCAAAA CCCGTGCGGC GAAGCCGCCC GCCGCCAAGC GCGGCGCAAT CAAGCTCGCC
GCGCCCCGCA CGCGCAAGGC CGCCTGA
 
Protein sequence
MLYQFHEFQR AMLSPLTAWA QAASKSFANP SSPLSLVPGA TRLAAGYELL YRLGKDYEKP 
EFGIHQIVKD GHNIPIVEQT IIEKPFCRLL RFKRYADDSG AVGQLKDEPI VLVCAPLSGH
HATLLRDTVR TLLQDHKVYI TDWIDARMVP AEVGSFHLDD YVGYIQEFIR HIGARNLHVI
SVCQPTVPVL AAISLMASRG EDTPLTMTMM GGPIDARKSP TSVNSLATNR SHSWFENNVI
HTVPANYPGE GRKVYPGFLQ HTGFVAMNPE RHAQSHWDFY QSLLRGDEED AEAHRRFYDE
YNAVLDMAAE YYLDTIRIVF QEFRLAEGTW DIHGERVKPA DIHSTALMTI EGELDDISGS
GQTHVAHELC TGIEQAHRRS LTAEKCGHYG IFSGRRWRTI IYPQLRDFIR EHASQPKKPT
PQAGSTPNSP STPSRSASGS ETASAAPAKA AALKLSAKRT AAKTRAAKPP AAKRGAIKLA
APRTRKAA