Gene BMA1888 details

Gene Information

• Locus tag: BMA1888
• ID: 3090348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 1978646
• End bp: 1979110
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637562544
• Product: iojap domain-containing protein
• Protein accession: YP_103484
• Protein GI: 53725447
• COG category: [S] Function unknown
• COG ID: [COG0799] Uncharacterized homolog of plant Iojap protein
• TIGRFAM ID: [TIGR00090] iojap-like ribosome-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.791339
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATTC GCAAACTCCA GCGCGTAATC GTCGACGCTC TCGAAGACGT CAAGGCGCAA 
GACATCAAAG TGTTCAACAC GAGCCACCTG ACCGAGCTGT TCGACCGCGT GATCGTCGCG 
TCGGGCACGT CGAACCGGCA AACGAAGGCG CTCGCGTCGA ACGTGCGCGA CAAGGTCAAG 
GAAGCCGGCG GCGACATCGT CAGCTCCGAG GGCGAGGACA CGGGCGAATG GGTGCTCGTC 
GACTGCGGCG ACGCGGTCGT CCACATCCTG CAGCCGGCGC TGCGCCAGTA CTACAACCTC 
GAGGAGATCT GGGGCGACAA GCCGGTGCGG ATGAAGCTCG GCGGCCCGGC GGCGCACGCG 
CGCGGCGCGC GGGCGGCCGA CGGCGCGGAC GACGACGAAT CGGACGAGCA CGAGACGCCC 
GCCGCGCGCC CCGCCCGCAA GGCGACGGCC GCGCGCCGCC GCTGA 

 

Protein sequence

MDIRKLQRVI VDALEDVKAQ DIKVFNTSHL TELFDRVIVA SGTSNRQTKA LASNVRDKVK 
EAGGDIVSSE GEDTGEWVLV DCGDAVVHIL QPALRQYYNL EEIWGDKPVR MKLGGPAAHA 
RGARAADGAD DDESDEHETP AARPARKATA ARRR