Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1882 |
Symbol | |
ID | 3089693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 1972540 |
End bp | 1973319 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637562538 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_103478 |
Protein GI | 53725433 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0800306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGG GAATCGCAGG ACGGACCGCG CTCGTGTGCG CGGCCAGCAA GGGGCTCGGG CGCGGTTGCG CGCAGGCGCT CGCCGCCGAG GGCGCGCGGC TCGTGATCGT CGCGCGCACG CGCGAGACGC TCGAGGCCGC CGCGGCCGAT ATTCGCGCGG CGACGGGCGC CGACGTGACG GCCGTCGCGT GCGACATCAC GACGCCCGAG GGGCGCGCGG CGGCGCTCGC CGCATGCCCG CAGCCGGACA TTCTCGTGAC GAACGCGGGC GGCCCGCCGC CGGGCGACTT CCGCGATTTC ACGCACGACG ACTGGATTCG CGCGCTCGAG GCGAACATGC TCACGCCGAT CGAGCTGATC CGCGCGAGCG TCGACGGGAT GATCGCGCGC CGCTTCGGGC GCGTCGTCAA CATCACGAGC TCGGCCGTGA AGGCGCCGAT CGACGTGCTC GCGCTGTCCA ACGGCGCGCG CTCGGGGCTC ACGGGCTTCG TCGCGGGGCT CGCGCGCAAG GTGGCCGAGC ACAACGTGAC GATCAACAAC CTGCTGCCGG GCCTCTTCGA CACCGACCGG ATCGCGACGA CGCTCGCCGC GGCGGCGCAG GCGCAGGGCG CGACCGTCGA CGAGCTGCGC GCGCGGCGCA CGAAGGAAAT TCCGGCGAAG CGCCTCGGCA CACCGCACGA GTTCGGCGCG GCGTGCGCGT TCCTCTGCAG TGTCCATGCG GGCTACATCA CCGGGCAGAA CTGGCTGCTC GACGGCGGCG CGTATCCCGG CACATTTTGA
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Protein sequence | MDLGIAGRTA LVCAASKGLG RGCAQALAAE GARLVIVART RETLEAAAAD IRAATGADVT AVACDITTPE GRAAALAACP QPDILVTNAG GPPPGDFRDF THDDWIRALE ANMLTPIELI RASVDGMIAR RFGRVVNITS SAVKAPIDVL ALSNGARSGL TGFVAGLARK VAEHNVTINN LLPGLFDTDR IATTLAAAAQ AQGATVDELR ARRTKEIPAK RLGTPHEFGA ACAFLCSVHA GYITGQNWLL DGGAYPGTF
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