Gene BMA1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1547 
Symbol 
ID3088369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1603401 
End bp1605710 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content64% 
IMG OID637562237 
ProductOMP85 family outer membrane protein 
Protein accessionYP_103187 
Protein GI53723731 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID[TIGR03303] outer membrane protein assembly complex, YaeT protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTCA AACCTCATCG CTTCGTACCT AAGACGGTTG CTGCCGCGGC GCTCGCCGCG 
CATGGTCTCG CGGCACACGC AACGGCGCCC TTCGTGGTGC AGGACATCAA GATCGAAGGC
TTGCAGCGCG TCGAAGCGGG TTCCGTGTTC GCCTACCTGC CGATCAAGCA GGGCGATACG
TTCACCGACG GCAAGGCATC CGAGGCGATT CGCGCGCTGT ACGCGACGGG CTTCTTCAAC
GACGTGCGGA TCGCGACGCA GGGCGGCGTC GTGATCGTCC AGGTGCAGGA GCGTCCGGCG
ATCGCGTCGA TCGACTTCAC CGGCATCAAG GAATTCGACA AGGACAACCT GAACAAGGCG
CTGAAGGCCG TGGGCCTGTC GCAGGGGCGT TACTACGACA AGGCGCTCGT CGACAAGGCG
GAGCAGGAGC TCAAGCGCCA GTACCTGACG CGCGGCTTCT ACGCGGCGGA AGTGTCGACG
ACGGTCACGC CGGTCGACGC GAACCGCGTG TCGATCCTGT TCGCGGTCGC CGAAGGCCCG
AGCGCGAAGA TTCGCCAGAT CAACTTCATC GGCAACAAGG CGTTCAAGAC GAGCACGCTG
CGCGACGAGA TGCAGCTGTC CACGCCGAAC TGGTTCTCGT GGTACACGAA GAACGACCTG
TACTCGAAGG AAAAGCTGAC GGGCGACCTC GAGAACGTGC GCTCGTACTA CCTGAACCGC
GGGTACCTGG AGTTCAACAT CGAGTCGACG CAGGTGTCGA TCTCGCCGGA CAAGAAGGAC
ATGTACCTGA CGGTGGCGCT GCACGAAGGC GAGCCGTACA CGGTATCGAG CGTGAAGCTC
GCCGGCAATC TGCTGGATCG CCAGGCCGAG CTCGAGAAGC TCGTCAAGAT CAAGCCGGGC
GACCGCTTCT CGGCCGAGAA GCTGCAGCAG ACGACGAAGG CGATCGTCGA CAAGCTCGGC
CAGTACGGCT ACGCGTTCGC GACGGTGAAC GCGCAGCCGG AAATCGATCA GGCGACGCAC
AAGGTGGGCC TCACGCTCGT CGTCGATCCG AGCCGGCGCG TGTACGTGCG GCGGATCAAC
ATCGTCGGCA ACACGCGCAC GCGTGACGAG GTGGTGCGCC GCGAGATGCG CCAGCTCGAG
AGCTCGTGGT TCGATTCGAG CCGTCTCGCG CTGTCGAAGG ACCGCGTGAA CCGTCTCGGC
TACTTCACCG ACGTCGACGT GACGACGGTG CCCGTCGAGG GCACGAACGA CCAGGTCGAC
GTGAACGTGA AGGTCGCCGA AAAGCCGACG GGCGCGATCA CGCTCGGCGC GGGCTTCTCG
TCGACGGACA AGGTCGTGCT GTCGGCCGGC ATCTCGCAGG ACAACGTGTT CGGCTCCGGC
ACGAGCCTCG CGGTGAACGT GAACACCGCG AAGAGCTACC GCACGCTGAC CGTCACGCAG
GTCGACCCGT ACTTCACCGT CGACGGCATC AAGCGGATCA CCGACGTGTT CTACCGCACG
TATCAGCCGC TCTATTACTC GACGAACTCG AGCTTCCGGA TCATCACGGC GGGCGGCAAC
CTGAAGTTCG GCATTCCGTT CTCGGAAACC GACACGGTCT ATTTCGGCGC GGGCTTCGAG
CAGAACCGCC TCGACGTCGA TTCGAACACG CCGCAGTCGT ATCAGGATTA CGTGAACGAG
TTCGGCCGCG TGTCGAACAC GGTGCCGCTC ACGATCGGCT GGTCGCGCGA CGCGCGCGAC
AGCGCGCTGA TCCCGAGCCG CGGCTACTTC ACGCAGGCGA ACGCCGAATA CGGCGTGCCG
GTGGGCAAGA TCCAGTACTA CAAGATGGAC GTGCAGGGCC AGTACTACTA CTCGTTCGCG
CGCGGCTTCA TCCTCGGCCT GAACTTCCAG GCGGGCTACG GCAACGGCAT CGGCAATCCG
TACCCGATCT TCAAGAATTA CTACGCGGGC GGTATCGGCT CCGTGCGCGG CTACGAGCCG
AGCTCGCTCG GCCCGCGCGA CACGAAGACG AACGATCCGA TCGGCGGCTC GAAGATGGTC
GTCGGCAACA TCGAGCTGAC GTTCCCGCTG CCGGGCACGG GCTACGACCG CACGCTGCGC
GTGTTCACGT TCCTCGACGG CGGCAACGTG TGGGGCAATG CGCCGGGCGG CACGAGCACG
GGCGCGAACG GTCTGCGCTA CGGCTACGGT ATCGGCCTCG CGTGGATCTC GCCGATCGGG
CCGCTCAAGC TGAGCTTGGG CTTCCCGCTG CAGAAGCACG AAGGCGATCA GTATCAGAAA
TTCCAGTTCC AGATCGGGAC GGCGTTCTGA
 
Protein sequence
MLFKPHRFVP KTVAAAALAA HGLAAHATAP FVVQDIKIEG LQRVEAGSVF AYLPIKQGDT 
FTDGKASEAI RALYATGFFN DVRIATQGGV VIVQVQERPA IASIDFTGIK EFDKDNLNKA
LKAVGLSQGR YYDKALVDKA EQELKRQYLT RGFYAAEVST TVTPVDANRV SILFAVAEGP
SAKIRQINFI GNKAFKTSTL RDEMQLSTPN WFSWYTKNDL YSKEKLTGDL ENVRSYYLNR
GYLEFNIEST QVSISPDKKD MYLTVALHEG EPYTVSSVKL AGNLLDRQAE LEKLVKIKPG
DRFSAEKLQQ TTKAIVDKLG QYGYAFATVN AQPEIDQATH KVGLTLVVDP SRRVYVRRIN
IVGNTRTRDE VVRREMRQLE SSWFDSSRLA LSKDRVNRLG YFTDVDVTTV PVEGTNDQVD
VNVKVAEKPT GAITLGAGFS STDKVVLSAG ISQDNVFGSG TSLAVNVNTA KSYRTLTVTQ
VDPYFTVDGI KRITDVFYRT YQPLYYSTNS SFRIITAGGN LKFGIPFSET DTVYFGAGFE
QNRLDVDSNT PQSYQDYVNE FGRVSNTVPL TIGWSRDARD SALIPSRGYF TQANAEYGVP
VGKIQYYKMD VQGQYYYSFA RGFILGLNFQ AGYGNGIGNP YPIFKNYYAG GIGSVRGYEP
SSLGPRDTKT NDPIGGSKMV VGNIELTFPL PGTGYDRTLR VFTFLDGGNV WGNAPGGTST
GANGLRYGYG IGLAWISPIG PLKLSLGFPL QKHEGDQYQK FQFQIGTAF