Gene BMA0935 details

Gene Information

• Locus tag: BMA0935
• ID: 3089875
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 985939
• End bp: 987720
• Gene Length: 1782 bp
• Protein Length: 593 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637561703
• Product: RND efflux system, outer membrane lipoprotein, NodT family protein
• Protein accession: YP_102662
• Protein GI: 53725431
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1538] Outer membrane protein
• TIGRFAM ID: [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGTCTC CGGCAATGAG AGGGACGCTT GCACTCGCGG TTCTTGCAAT CTCATTAATA 
ATGGCCGGAT GCGCAAGCAT GGGCGATGTT GCACCGCAAG ACAAGCAGGT CGATCCGGCG 
TCGCTCGACG CGGGCGCGGC GATCGCGGCG GCCGAGCGCG ACGCCGGCTG GCCCGCGGCC 
GACTGGTGGC GCGCGTATCG CGATCCGCAG CTCGATTCGT GGATCGTCGC GTCGCTCGCC 
GGCAACCCTT CGCTCGCCGC CGCGCAGGCC CGCGTGCGCG AGGCGCAGTC GCTCGCGCGC 
ATCGCGCACG CCGAGGAGCT GCCGCAGTTG AACGGCAACC TGTCGCTGAT GCGCCAGCAC 
TGGCCGGACA ACGTCTATTA CGGCCCGGGC CCGCTCGCGA ACGCCGACAC GTGGAACAAC 
ACGGGCACGC TGAGCCTGTC GTACCACCTC GATCTGTGGG GCAAGGACAA GCACAACGCC 
GAGCGCGCGC TCGACGCGGC GCGCGCCCGC GCGGCCGACG CGCGTGCCGC GCAGCTCGAG 
CTCGAGGCGA ACGTCGTGCG CGCGTACGTC GATTTCGCGA AGAACTACGC GCTCCTCGAC 
ATCGCGCACG CGACCTACGA GCGCCAGAAC GCGCTCGCCG AACTGGCGCG CAAGCGCCTG 
CGCGCGGGCA TCGGCACGCA ACTCGAGGTG AGCCAGGCCG AGGCGCCGCT GCCCGATTAT 
TCGCGGCAGA TCGACTCGTA TGAAGAGGCG ATCCAGCTCG GCCGTCACCA GCTCGCCGCG 
CTCGCGGGCA AGGGGCCGGG CGCGGGCGCC TCGCTCGCGC GGCCGAAGCT CGCGCTCGAC 
GCGAACGCCG CCCTGCCGTC CGCGCTGCCC GCCGAGCTGC TCGGCCGCCG GCCGGACATC 
GTCGCCGCGC GCTGGATGGT CGACGCGCAG GCGCGCGGCA TCGACGTCGC GAAGGCCGCG 
TTCTATCCGA ACGTCGACCT GATCGCGTCG CTCGGCGGCT TCGCGGTCAG CGCGCCGTTC 
GCGACGTTCC TGCGCGCGAT GAACGGCGGC TGGTCGGCCG GCCCCGCGCT CACGCTGCCG 
ATCTTCGAGG GCGGCCGGCT GCGCGCGCAA CTGGGCGTCG CGTCGGCGGG CTACGACCAG 
GCGGTCGAGC ACTACAACCA GACGATCGTC GGCGCGCTGA AGGACATCGC CGACAACGTC 
GTGCGCCTGC ATTCGCTCGA TTCGCAGCAA AAGGACGCGG CGCGCGCGGT CTCGCTCACG 
CGGCGCTCGT ACGATCTGTC GCATGCGGGC TTCAGCCGCG GGCTCACCGA CTACGTGAAC 
GTGCTCATCG CGCAGAGCCA GTTGCTGACC GCGCAGGAGA ACCAGACCCG CATCGAGGCC 
GCGCGCCTCG CCGCGCACGC GTCGCTGATG GTCGCGCTCG GCGGCGGGCT CGAAACCGGG 
CGCGACGCGC CGCACGACGC GCCCGCGGGC GACGCGCGGC GGACGGGTGC TTCGGGTGCT 
TCGGGTGCTT CGGGTGCTTC GGGTGCCTCG GGTGCCTCGG GTGCCTCGGG TGCTTCGAGC 
ACCGCGGGCG CTTCGGCCAC CGCATCCGCG TCGGCCGCCG GCCACGCGCC GGCTGGCGCC 
GCTGCTCCGG CATCGCCCGC CGGCATCCGC GCGGCCGCCA GCGCTCGCGC GTCAATGCCG 
GCTCCCGCCG CGGCGGCGAC CGCGCCCGCC TTCGCGTCGC CCGTCGCCGG CGCCTCGACG 
CCGATGCCCG CTGCGACAGC GGCGGCCCGC GCCGCCCGCT AA 

 

Protein sequence

MQSPAMRGTL ALAVLAISLI MAGCASMGDV APQDKQVDPA SLDAGAAIAA AERDAGWPAA 
DWWRAYRDPQ LDSWIVASLA GNPSLAAAQA RVREAQSLAR IAHAEELPQL NGNLSLMRQH 
WPDNVYYGPG PLANADTWNN TGTLSLSYHL DLWGKDKHNA ERALDAARAR AADARAAQLE 
LEANVVRAYV DFAKNYALLD IAHATYERQN ALAELARKRL RAGIGTQLEV SQAEAPLPDY 
SRQIDSYEEA IQLGRHQLAA LAGKGPGAGA SLARPKLALD ANAALPSALP AELLGRRPDI 
VAARWMVDAQ ARGIDVAKAA FYPNVDLIAS LGGFAVSAPF ATFLRAMNGG WSAGPALTLP 
IFEGGRLRAQ LGVASAGYDQ AVEHYNQTIV GALKDIADNV VRLHSLDSQQ KDAARAVSLT 
RRSYDLSHAG FSRGLTDYVN VLIAQSQLLT AQENQTRIEA ARLAAHASLM VALGGGLETG 
RDAPHDAPAG DARRTGASGA SGASGASGAS GASGASGASS TAGASATASA SAAGHAPAGA 
AAPASPAGIR AAASARASMP APAAAATAPA FASPVAGAST PMPAATAAAR AAR