| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA0067 |
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| Symbol | cpdB |
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| ID | 3090962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei ATCC 23344 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006348 |
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| Strand | + |
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| Start bp | 73171 |
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| End bp | 75231 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637560945 |
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| Product | 2`,3`-cyclic-nucleotide 2`-phosphodiesterase |
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| Protein accession | YP_101916 |
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| Protein GI | 53724610 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.348969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTCC CCTTGCGTTT TCGCCGGCGG CGCCTTGCCG CCGCCCTCGT CGCGTGCGCG
GCGCTCGTCG CGGGCTGCAA CGACGACGTC GATTCGCCCG GCGCGCAGTC CGGCGCGAGC
GCGCCCGCCG GCACGAAGGC GACGCTCGCC GTGCTCGAGA CGACCGATCT GCACACGAAC
GTGCTGTCGT ACGACTACTT CAAGCTCGCG GCCGACAAGT CGCTCGGCTT CGAGCGGGTC
GCGACGCTGA TCGCGCAGGC GCGCGCGCAA TATCCGAACA CGCTGCTGCT CGATAACGGC
GACACGATCC AGGGCACGGC GCTCGCCGAC TATCAGGCGC TCGTGAAGCC CGTGTCGTGC
GGCGAGACGC TTGCGATCTA CAAGGTGATG AACGCGGCGA AGTTCGACGG CGGCGGCATC
GGCAATCACG AATTCAACTA CGGGCTGCCG TACCTGTCGC AGGTGACGGG CAACGCGTTC
GCCGTCGACG GCCTGCCCGA TCCGGCCCGG CAGAAGAAAT GCGCGGGGCC GGACTTCCCG
CAGGTGCTCG CGAACGTGAT CAGCGCGAAG ACGAACGCGC CCCTCTTCAC GCCGTACACG
ATCCTCACGA AGAACGTCAC CGCGACGACG CCCGACGGCC GCACGGTCAC GGCGCCCGTG
AAGGTCGGCA TCATCGGCTT CACGCCGCCC GCGATCATGA ACTGGGACAA GCGCTGGCTC
GACGGCAAGG TCTATACGAC GGGCCTGAAG GAAGCCGCCG AGAAGTACAT TCCCGAGATG
CGCGCGAAGG GCGCGGACCT CGTCGTCGCG ATCTCGCACG GCGGGCTCGA CAACTCGCCG
TACTCGCCGA CGATGGAAAA CGGCAGCTGG TGGCTGTCCA CCGTGCCCGG CATCGACACG
ATGCTGATCG GCCACTCGCA CCAGGTGTTC CCCGACGCGA CGAGCACCGT CGCGCAGTTC
AACCTGCCGG GCGTCGACAA GGTCAAGGGC ACGGTCAACG GCGTGCCGAC CGTGATGGCG
AACTACTGGG GCAAGCACCT CGGCGTGATC AAGCTCGGCC TCGCGTTCGA CGGCAAGACG
TGGCGCGTCG ACAAATCGCA GACCACCGTC GAGGCGCGCT CGATCCAGAA CCCGGACAAG
AGCTACGTCG ACGCCGATCC GTCGGTGGCC GCGGCGATCG CGGCCGAGCA CCAGGCGACG
ATCGACTACG TGAAGACGCC GATCGGCAGC ACCGACTACC GGATGACCAG CTACTTCGCG
GACGTGGGCG ATCCGGGCGC GATCCAGCTC GTCAACGAGG CGCAGGCCGA CTACGTCGCG
AACTACGTGC AGACGAACCT GCCGCAGTAT GCGTCGCTGC CGGTGCTGTC GGTGAGCGCG
CCGTTCAAGA GCGGCTTCGG CGGCGGCACC GATTTCACCG ACGTCGCGGC GGGCGCGCTC
GCGATCAACA ACGCGGCCGA TCTCTACCTG TATCCGAACA CGGTCTACGC GGTGAAGGTG
AGCGGCGCGG ACATCAAGAA CTGGCTCGAG ACCGCGGCGA AGCGCTTCAA CACGATCGAC
CCGACGAAAG CGACCGTGCA GAAGCTCGTG AGCACGTTCC CCGGCTACAA CTTCGACATG
TTCACGTCCG CCGATCTGCG CTACGAGATC GACGTCACGC AGCCGGTGGG CAGCCGGATC
CGCAACCTCG CGTACAAGGG CGCGCCGATC GATCCGAATG CGCAGTTCAT CGTCGCGACG
AACAACTACC GCGCGAGCGG CGGCGGCAAC TTCCCCGGCC TGGACGGCAG CAAGACGATC
TTCGCGTCGC CCGACGCGAA CCGCGACGTG CTGATCGCAT ACATCAAGAA GCGCGGCCGG
ATCACGCGCG CGGCGGACGG CATGCAGCGC AGTTGGCGCT TCACGAAGCT CGCGGGCTCG
GTCGCGCACG TGCAGTTCGC GTCGGCGCCG AACCTCGCGG CGCTCGCGAG CACCGCGGGC
CTCGCGGGCA TCACGCAAGT CGCGGCCGAC GACGGCTCCG GCAAGGGACT CGCGACTTAC
GAGATCGATC TGACGCAATG A
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| Protein sequence | MPFPLRFRRR RLAAALVACA ALVAGCNDDV DSPGAQSGAS APAGTKATLA VLETTDLHTN
VLSYDYFKLA ADKSLGFERV ATLIAQARAQ YPNTLLLDNG DTIQGTALAD YQALVKPVSC
GETLAIYKVM NAAKFDGGGI GNHEFNYGLP YLSQVTGNAF AVDGLPDPAR QKKCAGPDFP
QVLANVISAK TNAPLFTPYT ILTKNVTATT PDGRTVTAPV KVGIIGFTPP AIMNWDKRWL
DGKVYTTGLK EAAEKYIPEM RAKGADLVVA ISHGGLDNSP YSPTMENGSW WLSTVPGIDT
MLIGHSHQVF PDATSTVAQF NLPGVDKVKG TVNGVPTVMA NYWGKHLGVI KLGLAFDGKT
WRVDKSQTTV EARSIQNPDK SYVDADPSVA AAIAAEHQAT IDYVKTPIGS TDYRMTSYFA
DVGDPGAIQL VNEAQADYVA NYVQTNLPQY ASLPVLSVSA PFKSGFGGGT DFTDVAAGAL
AINNAADLYL YPNTVYAVKV SGADIKNWLE TAAKRFNTID PTKATVQKLV STFPGYNFDM
FTSADLRYEI DVTQPVGSRI RNLAYKGAPI DPNAQFIVAT NNYRASGGGN FPGLDGSKTI
FASPDANRDV LIAYIKKRGR ITRAADGMQR SWRFTKLAGS VAHVQFASAP NLAALASTAG
LAGITQVAAD DGSGKGLATY EIDLTQ
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