| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK4294 |
|---|
| Symbol | brnQ |
|---|
| ID | 3025802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 4403666 |
|---|
| End bp | 4404991 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637548510 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_085873 |
|---|
| Protein GI | 52140955 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT CTTTAAAGTT TTCTGAGATG TTTGCAATAA GTTTAATGTT ATTTGCACTA
TTTTTCGGTG CAGGTAATAT GATTTTTCCA CCAGCGTTAG GACAAGGAGC TGGAACAGAT
GTATGGATTG CATTGTTTGG TTTTATCGTA ACAGGCGTTG GGTTGCCTTT ATTAGGAGTT
ATCGTTATAG CTCTTAAGGG AGATATTAAT GAGTTAGCAG GGCGTGTACA CCCTATATTC
GCACTAGTTT TTATTACTGC AATTTATTTA TGTTTAGGTG TATTCGTAAG CGTGCCGCGT
ACAGGAACAG TTGCTTATGA AATGAGTGTT GCACCGTTCT TACCAAGTGA GATAGCTGGT
CAATCGTACC CGCTTGTTAT CTTTACATTT ATTTTCTTTG CTGTAACTTT TTATTTAGCT
TTAAACCCAT CAAAATTAGT GGGCCGCATC GGTAAAGTAT TAACTCCGAT TTTATTAGCT
GTTATTGCAA TTATTATAGT GAAAGCACTT ATTACACCGA TTGGAGAATT TGGTGCACCG
ACAGAAGCAT ATAGTGCTCC GCTCTTTAAA GGTTTTATTG ACGGATATTT AACTTTAGAT
GGACTTGCAG CACTTGTTTT CGGAAATGTT GTTATTCATG CTTTAAAAGG AAAAGGTATT
ACAAATAAAA ATAGCATTGC AAAAGTAACA ATTTTTGCAG GATTTATTGC AGCAATTGGT
TTACTACTCG TTTACTTAGC GCTTGCTTAT CTTGGAGCTT CTAGTGTCTC TCTTGGAATG
GGAGCAAACG GAGGAATTAT TTTAACAAAC GTTGTAAATC ATTTATTCGG TAGTTACGGA
ACTTTATTAT TAGGAATCGC AATTTCAGCA GCATGTTTAA CAACTTCAGT AGGGATTGTC
GCAGCTTGCG GAGAATATTT CTCCTCTTTA TTACCGAAGC TTTCTTATCA AAAAGTTGTT
TTCATTTTCT GTGTATTAGC ATTTATGGTA GCGAATCTTG GTTTAACTCA GTTAAATGCA
TTAGCATTAC CAATCTTAAT CGCAATTTAC CCAATTGGTA TCGTGCTAAT TATATTATCA
CTTGTTGAAA ACTATATTCG TCTTCCTTTA GTAATGTATG TAGGTGGTAT TGTAGGAGCA
TTCATGATTA GCTTCTTTGA TGGATTACAC AATGCAAATC TTGAGATTGC AGCATTAACA
CCAATTTTAA ATAAAATTCC ATTATATAGT GTTGGGATTG GTTGGTTCGT TCCTGCTCTA
GTAGGTATTG TAATTGGATA TGTCATTTCA TTGTTTCAAA AGCAAGAAGT TGCTGTAGAA
AAATAG
|
|---|
| Protein sequence | MKSSLKFSEM FAISLMLFAL FFGAGNMIFP PALGQGAGTD VWIALFGFIV TGVGLPLLGV
IVIALKGDIN ELAGRVHPIF ALVFITAIYL CLGVFVSVPR TGTVAYEMSV APFLPSEIAG
QSYPLVIFTF IFFAVTFYLA LNPSKLVGRI GKVLTPILLA VIAIIIVKAL ITPIGEFGAP
TEAYSAPLFK GFIDGYLTLD GLAALVFGNV VIHALKGKGI TNKNSIAKVT IFAGFIAAIG
LLLVYLALAY LGASSVSLGM GANGGIILTN VVNHLFGSYG TLLLGIAISA ACLTTSVGIV
AACGEYFSSL LPKLSYQKVV FIFCVLAFMV ANLGLTQLNA LALPILIAIY PIGIVLIILS
LVENYIRLPL VMYVGGIVGA FMISFFDGLH NANLEIAALT PILNKIPLYS VGIGWFVPAL
VGIVIGYVIS LFQKQEVAVE K
|
|---|
| |