| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK3846 |
|---|
| Symbol | xerD |
|---|
| ID | 3023719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 3976478 |
|---|
| End bp | 3977368 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637548060 |
|---|
| Product | site-specific tyrosine recombinase XerD |
|---|
| Protein accession | YP_085426 |
|---|
| Protein GI | 52141402 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0256715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGATC AATTAAAAGA TTTTATTCAT TATATGGTTG TCGAAAAAGG GCTAGCGAAA
AATACAGTAG TATCTTATGA ACGTGATTTG AAAAGTTATG TGAAGTATTT GCAAAAGGTA
GAACAAGCGA AAAGCTTTCA CGAAGTGACA CGCTTGCACA TTGTTAATTT TCTGCAGCAC
TTAAAAGAAA ACGGAAAATC TTCGAAAACA TTAGCACGTC ATATTGCATC GATTCGTTCG
TTTCACCAAT TTTTACTTCG TGAACGAGCA GTAGAGCACG ATCCATCCGT ACATATTGAA
ACGCCGCAAG GAGAACGGAA ATTACCGAAA GTATTGTCGG TTGATGAAGT AGAGGCGTTA
CTTCAGACAC CCAAAATGAC GAGTGCTTTT GGGGTTCGTG ATAAAGCGAT GCTAGAGTTA
CTGTATGCAA CAGGACTTCG TGTTTCAGAA TTAATTGCCT TAAATTTAGA AGATGTACAT
TTAACGATGG GATTTGTTCG TTGCATAGGG AAAGGGAATA AAGAAAGAAT TATTCCACTA
GGAAGCTTAG CGACGGAAGC GATTCAAAAG TATATTGAAA AGGGAAGAAG AGAATTGATG
GGGAAAAAAG TAGTAGATGC ACTCTTTTTA AACCATCATG GGAATCGATT ATCAAGACAA
GGATTTTGGA AAATTTTAAA ACGATTAGCG AAAGAAGCAA ATATTGAAAA AGAGCTTACA
CCTCATACGT TGCGCCATTC TTTTGCTACG CATTTATTAG AAAATGGAGC AGACTTGCGT
GCGGTGCAAG AAATGCTTGG ACATGCAGAT ATTTCAACGA CACAAATTTA TACGCATGTT
TCAAAAACTA GATTAAAAGA TGTATATAAA CAGTTCCATC CGAGAGCATA G
|
|---|
| Protein sequence | MEDQLKDFIH YMVVEKGLAK NTVVSYERDL KSYVKYLQKV EQAKSFHEVT RLHIVNFLQH
LKENGKSSKT LARHIASIRS FHQFLLRERA VEHDPSVHIE TPQGERKLPK VLSVDEVEAL
LQTPKMTSAF GVRDKAMLEL LYATGLRVSE LIALNLEDVH LTMGFVRCIG KGNKERIIPL
GSLATEAIQK YIEKGRRELM GKKVVDALFL NHHGNRLSRQ GFWKILKRLA KEANIEKELT
PHTLRHSFAT HLLENGADLR AVQEMLGHAD ISTTQIYTHV SKTRLKDVYK QFHPRA
|
|---|
| |