| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK3730 |
|---|
| Symbol | pdhB |
|---|
| ID | 3023877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 3866362 |
|---|
| End bp | 3867339 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637547945 |
|---|
| Product | pyruvate dehydrogenase complex E1 component, beta subunit |
|---|
| Protein accession | YP_085311 |
|---|
| Protein GI | 52141517 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAA TGACAATGAT TCAAGCAATC ACTGATGCTT TACGCGTTGA AATGAAAAAT
GACCCTAACG TACTTGTGTT TGGTGAAGAC GTTGGTGTAA ACGGCGGTGT ATTCCGTGCT
ACTGAAGGTT TACAAGCTGA ATTCGGTGAA GACCGTGTAA TGGATACTCC ACTTGCAGAG
TCTGGTATTG GTGGACTTGC AGTTGGACTT GCACTTGAAG GATTCCGTCC AGTTCCAGAA
ATCCAATTCT TCGGTTTCGT TTATGAAGTA ATGGATTCAA TTTCTGGTCA ATTAGCTCGT
ATGCGTTACC GTTCTGGTGG ACGTTGGACT GCTCCAGTAA CAGTTCGTTC TCCATTCGGT
GGTGGCGTTC ATACTCCTGA ACTACATGCT GATAGCTTAG AAGGTTTAGT GGCTCAACAA
CCTGGTCTAA AAGTTGTTAT TCCGTCTACT CCATACGATG CAAAAGGTCT TTTAATCTCT
GCGATTCGTG ACAACGATCC AGTTATCTAC TTAGAGCATA TGAAATTGTA CCGTTCATTC
CGTCAAGATG TACCAGAAGG CGAATACACA ATTGATTTAG GCAAAGCTGA TATCAAACGT
GAAGGTACAG ATGTATCTGT TATCGCTTAC GGTGCTATGG TTCACGCTGC ACTAAAAGCT
GCTGAAGAAC TTGAAAAAGA AGGTATCTCT TTAGAGGTTG TTGACTTACG TACAGTTCAA
CCATTAGATA TCGAAACAAT CATCGCTTCT GTTGAAAAAA CAGGCCGCGT AGTTGTAGTT
CAAGAAGCTC AAAAACAAGC TGGTATTGCA GCTAACGTTG TAGCGGAAAT TAACGACCGT
GCAATCTTAA ACTTAGAAGC TCCAGTTGTA CGTGTTGCAG CTGCTGATAC AGTATTCCCA
TTCTCTCAAG CTGAGAGCGT ATGGTTACCA AACCACAAAG ATATTGTTGA AGCTGTTAAC
AAAGTAATGA ACTTCTAA
|
|---|
| Protein sequence | MAQMTMIQAI TDALRVEMKN DPNVLVFGED VGVNGGVFRA TEGLQAEFGE DRVMDTPLAE
SGIGGLAVGL ALEGFRPVPE IQFFGFVYEV MDSISGQLAR MRYRSGGRWT APVTVRSPFG
GGVHTPELHA DSLEGLVAQQ PGLKVVIPST PYDAKGLLIS AIRDNDPVIY LEHMKLYRSF
RQDVPEGEYT IDLGKADIKR EGTDVSVIAY GAMVHAALKA AEELEKEGIS LEVVDLRTVQ
PLDIETIIAS VEKTGRVVVV QEAQKQAGIA ANVVAEINDR AILNLEAPVV RVAAADTVFP
FSQAESVWLP NHKDIVEAVN KVMNF
|
|---|
| |