| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK3506 |
|---|
| Symbol | |
|---|
| ID | 3024301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | + |
|---|
| Start bp | 3629637 |
|---|
| End bp | 3632372 |
|---|
| Gene Length | 2736 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637547722 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_085088 |
|---|
| Protein GI | 52141742 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.143738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTTTAT TGAAATTAAA TAAAAATTTA CAACTATGTA TATTAATTGG AACATTAATG
TGTTATTCAA TCTATTTTAT GTTTTTCTAT CTGTTCCCCA CTCATTTTTC AAATTCGGAT
GTACGCTTCG CTTCACTTAT TGTTGAAGCC ATTACATTTG TATCACTCAT TTATTCTATA
TATTCTAAAA AAGTTAGTTC AAATCCGTTT TGGATATGTA TCACGATAGC AATTGGTAGT
TTTTTATTAG GAAAAATAGT ATATACATAT CAAGATAGCT TCTTCAAAAT TCCAATACAT
CGTTTTACTA TTTCTGATGT GTTTTATATG CTTTTTCTAC TCTTCTGTCT TATCGCTTTC
TGCTATAAAA TCCTAAAAGA ATGCAATAAA TGGGAAAAAG CATTCTTTAT TTGTGATATA
TGCATAGTAC TTACTTCCAT ATTCACATTA GAGTGGTATT TATTTAATCA ACCAAATTTA
AATATATTCT CTCTTTCACT AGGAGATGTT TTTCTTTCAT TTCTATATCC AATTGCAGAT
TTATTATTCC TTCTACTAGG TGTTAGTCTC TTTTTCCGTC CAACAATTTT TAATTCTAAA
CGGAAAATTT ATATCTTTAT TTTTGTATTA ATAAGTTCTG CAACTTTTAA CTATATTTAT
TTTTACTTAA ATAACCATTT ATCAACTGAA ACGATAACAT TATTACGTCT TTTATATAGA
ATACCTATAT TACTTATTGC AATAGCTGGA TCTATTTCAG AAGATCGTAA TAGTCATAAA
AATTATTTCA TTGTAAACCC TATAATAGGA AAAAAGGCTT TAGTTGTATT TCCCTATCTT
GCTGTTGCAA TACTAATCGG GTTTACATTA AAGGAACAAA CATCATCTTC CACTCTCATT
ACGGGAAATT GTATTACTTT TATTTTCGTA CTCATTCGTC ATTCTATTGT ACGTATGCAA
AACAATTCCC TAACTAAACG TTTACAGGCA TTTAATGCTC AACTAGAAGA AAAGGTTACT
TTACGGACTT CAGATTTAGT TCATAAATCT GAGGCTCTAT CTCAAAAGCA ACAAAAATTC
AAATCATTAT ATGAATATCA TCCTGACCCT ATTTTTACAA TTGATTTAAA TGGCGTATTC
TTAAATGTAA ATAAAGCTGG AAGTATACTA CTCGGTGCAC CAACGGATGA GTTACTTGGT
GAAACTTGTT TTTCGATTAT TTTAGATGAA GACAAATATA AACTAGCATC TGCATTAGAA
AAAGTGAAAC AACAAGAATC AGCATCCTTA CAACTTAGTT CTCAATATAA AGATGGATTT
ACTTATTCTT TATACGTTAC CATCGTCCCT ATTATGATAG ACGGGCAAAT TTCAGGAAGC
TATATTATGA TGAAAGATAT TACTGCGCTA AAAAAACAGC AAGAAGAAAT AAAATATTTA
GCATTCCATG ATACTGTAAC GAAAATTGGG AACCGTGCCT TTTTCCATAA GAAATTAAAA
AGAATTATAA AAAATGCTAA AACGACAGAA AGCGAGTTTG CATTATTATA TTTGGACTTA
GATCGCTTTA AAGCAATTAA TGATACACTT GGACATTCGG CAGGAGACTA CATATTAGAA
GAAGTAGCGA AGCGATTCCA ATCATGTCTT CCATCACATA CTCATCTATC AAGAATCGGT
GGCGATGAAT TTACAATCTT AATTGAAAAC TATACTGACG AAGATTCCTT ATTCGAGTTA
TGCAACCAAT TATTTGAATG CATGGAAAAA TCGTTTGTCA TATATGAACA TACATTAACT
TTATCACTAA GTATCGGCAT CGCTATTTAT CCACATTCCG GAATCGATAC CGCTACACTT
CTGAAAAACG CTAATGTTGC AATGTATGAT GCGAAAGCAA AAGAACTTAA TTCTGTCTCT
ATTTATGATG ATGTAATTGC AAAAAAAATT GAAAGACGAT TGCGATTAGA AAAAGATTTA
CCAAATGCAA TTCAAAATGA AGAATTGTTC CTTTTATATC AACCTCAAGT TGATAGCAAG
TCTAATAAAA TTATCGGTGC TGAAGCTTTA ATTAGGTGGA ATCATCCTGA ATTAGGTGTT
ATTTCTCCAT ACGAGTTTAT TCCGATTGCA GAAGAAACGC TACAAATCAT TCCAATAGGA
AAATGGACAC TACAACAAGC TTGTGAGCAA ATGAAACGTT GGCACACAAG CGGATATTCA
CATTTGAAAA TAGGTGTAAA TTTATCTGCT AAAGAATTTG AACAAGAAGA TTTTGTAAAG
TCTATTTCTG CTACATTAAC AAATACAGGT TTACCAGCAA GTTCTCTTGA TCTTGAATTA
ACAGAACGAA TTGCAATGAT GGATGAGCGA GAAACATTAA TAAAACTGCG TACACTAAAG
AGTTTAGGCG TTCATATTTC AATTGACGAC TTTGGTACTG GTTATTCTTC GCTAGCCTAT
TTACCTTTAT ATCCAATCGA TACGTTAAAA ATCCCGAGAG AATTTATTAC AATGTCTGAA
ACATGTGATG ATGGAATGGA AATTATTAAA ACGATCATCA CATTAGCAAA TACATTAGGA
ATGTCAGTTA TCGCTGAAGG TGTAGAAACG AAAGAACACG TGAGTTTCCT TCAAAAAAAT
AATTGTGAAT TTATTCAAGG CTACTACTAC AGCAAGCCTA TTCATGCTGA TTCATTTTCT
ACTCTTCTCA AAAAAGGTGT TCGTTATAAC CATTAG
|
|---|
| Protein sequence | MILLKLNKNL QLCILIGTLM CYSIYFMFFY LFPTHFSNSD VRFASLIVEA ITFVSLIYSI
YSKKVSSNPF WICITIAIGS FLLGKIVYTY QDSFFKIPIH RFTISDVFYM LFLLFCLIAF
CYKILKECNK WEKAFFICDI CIVLTSIFTL EWYLFNQPNL NIFSLSLGDV FLSFLYPIAD
LLFLLLGVSL FFRPTIFNSK RKIYIFIFVL ISSATFNYIY FYLNNHLSTE TITLLRLLYR
IPILLIAIAG SISEDRNSHK NYFIVNPIIG KKALVVFPYL AVAILIGFTL KEQTSSSTLI
TGNCITFIFV LIRHSIVRMQ NNSLTKRLQA FNAQLEEKVT LRTSDLVHKS EALSQKQQKF
KSLYEYHPDP IFTIDLNGVF LNVNKAGSIL LGAPTDELLG ETCFSIILDE DKYKLASALE
KVKQQESASL QLSSQYKDGF TYSLYVTIVP IMIDGQISGS YIMMKDITAL KKQQEEIKYL
AFHDTVTKIG NRAFFHKKLK RIIKNAKTTE SEFALLYLDL DRFKAINDTL GHSAGDYILE
EVAKRFQSCL PSHTHLSRIG GDEFTILIEN YTDEDSLFEL CNQLFECMEK SFVIYEHTLT
LSLSIGIAIY PHSGIDTATL LKNANVAMYD AKAKELNSVS IYDDVIAKKI ERRLRLEKDL
PNAIQNEELF LLYQPQVDSK SNKIIGAEAL IRWNHPELGV ISPYEFIPIA EETLQIIPIG
KWTLQQACEQ MKRWHTSGYS HLKIGVNLSA KEFEQEDFVK SISATLTNTG LPASSLDLEL
TERIAMMDER ETLIKLRTLK SLGVHISIDD FGTGYSSLAY LPLYPIDTLK IPREFITMSE
TCDDGMEIIK TIITLANTLG MSVIAEGVET KEHVSFLQKN NCEFIQGYYY SKPIHADSFS
TLLKKGVRYN H
|
|---|
| |