| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK3472 |
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| Symbol | hfq |
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| ID | 3026515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus E33L |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006274 |
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| Strand | - |
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| Start bp | 3597656 |
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| End bp | 3597880 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637547688 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_085054 |
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| Protein GI | 52141772 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000100846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAGAATACG
TTTGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GATTAATTAA AGGATTTGAT
AATTTTACAG TCCTACTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT
TCTACATTCG TACCACAAAA AAATGTTTCA ATTGAATTAG AGTAG
|
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| Protein sequence | MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI
STFVPQKNVS IELE
|
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