| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK2557 |
|---|
| Symbol | dapA |
|---|
| ID | 3024530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 2680538 |
|---|
| End bp | 2681434 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637546780 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_084146 |
|---|
| Protein GI | 52142683 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.191613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCAAGGGGC ATTTCCAGTA TTAATCACAC CAATGGATGA GTTTCAAGAA
ATTAATTGGA ACGGTGTAAA ACAAAACGTA AACTACTTTA TTGAGCAAAA AGTGGCTGGC
ATTATTATAA ACGGAAGCAC AGGAGAGTTT GTTAGTTTGT TAAAAGAAGA ACGATTTAAA
ATGGTAGAAA CAGTATTAAA AGAAGTTAAT GGCCGTATTC CGGTTATTGT TGGAACTGCA
GCAGAAACGA CGAAAGAAAC GATTGAATTT ACAAAACATG CAGAAACGCA CGGAGCGGAC
TGCGCATTAA TTATTAACTC ATACTATTGT AAGCCAAAAG AAGAGGAAAT TTATTTTCAC
TTTAAAGAAA TCTCAAATGC TGTAAATATA CCAATTATGT TATATAATAA CCCGTTTACA
TCTGGTGTTG ATATGAGTAC AGAACTCATG CTACGTATCG GGAAAGACTG TGAAAATGTT
ACACATATTA AAGAATCTAG CGGAGATATT CGAAAAGCGA GAGATTTAGT AAGACAAGGC
GAAGGTGCTT TTCAAGTATT CTGCGGATCT GAAGATTTAG TTATGGAATC TTATTTAGTT
GGTGCGACGG GATGGGTTTC AGTAGCAGGG AATATCGTAC CGGGGCTTGT TACGAAAATG
TATGAGCATT TTCAAAATGG TGAATTAGAA AAAGCTTGGG AAATAAACGA TGCGATTTTA
CCTCTTTGCG AGTTTCTTGA AGGATCAGGA AAGTATGTAC AAATCGTGAA ACGCTCAATG
GAATTATACG GGCAAGCTGG AGGACCTTCA CGTTATCCGA GACTCGGATT AACTGAAGAA
GAAGATCAAA AACTTCAAAC GATTTTATCA AAAATTGCAG CACATGCGGC TGTTTAA
|
|---|
| Protein sequence | MKKIQGAFPV LITPMDEFQE INWNGVKQNV NYFIEQKVAG IIINGSTGEF VSLLKEERFK
MVETVLKEVN GRIPVIVGTA AETTKETIEF TKHAETHGAD CALIINSYYC KPKEEEIYFH
FKEISNAVNI PIMLYNNPFT SGVDMSTELM LRIGKDCENV THIKESSGDI RKARDLVRQG
EGAFQVFCGS EDLVMESYLV GATGWVSVAG NIVPGLVTKM YEHFQNGELE KAWEINDAIL
PLCEFLEGSG KYVQIVKRSM ELYGQAGGPS RYPRLGLTEE EDQKLQTILS KIAAHAAV
|
|---|
| |