| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK1303 |
|---|
| Symbol | lysA |
|---|
| ID | 3024019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | + |
|---|
| Start bp | 1395948 |
|---|
| End bp | 1397264 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637545536 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_082902 |
|---|
| Protein GI | 52143926 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTAC ACGGCACAAG CCGAATCAAT GGGCAAGGAC ACTTAGAAAT TGGAGGGTGC
GATACGACGC AGCTAGCAAA ACAATACGGA ACACCGCTTT ATGTATACGA TGAAGAGTCA
ATTCGAGGAA AGTGCCGCGC ATTTCATCGT GCTTTTAAAG AAAGTGGGTT CTCTTATCAA
GTAGCATATG CAAGCAAGGC GTTCTTGTGC ATGGAGATGT GCCGAGTAGC TCGTGAAGAG
AATATGTCAT TAGACGTTGT TTCTGGAGGG GAGTTATATA CTGCGCTTCA AGCAGGATTT
CCGGCATCAC GCATTCATTT TCACGGCAAT AATAAAACAG AAGAAGAAAT CGTGATGGCT
CTTCAGGCGA ATATTGGTTG TTTTGTTGTA GATAATTTCT TGGAATTAGA AATTTTGCAT
GATTTAGCAG TGCAACATGG GAAATTTGTG AACATATTAA TTCGTGTAAC ACCTGGAGTA
GAGGCGCACA CACATGAATA TATTACAACA GGTCAAGATG ATTCGAAATT TGGATTTGGC
GTGTCAAATG GTCAAGCGAT GCAGGCGATT GAGCTTGCTT TACAAAAATC AAATTATAAC
GTGTTAGGGA TTCATTCGCA TATTGGATCA CAAATATTTG AAACGGCTGG CTTTGTGCGA
GCGATTGAAG TTCTTCATCA ATTTTTAGAA GAATTGAGAG AGCGAACAAA CTATGTAGTA
AAAGTGCTAA ATGTGGGCGG AGGATTCGGA ATACGCTATA CGGAATCAGA TACACCATTA
ACTCTTGAGA CATATGTGCG AGCTGTAACA AGTGCAGTGA GAGAACAATT TACAGTATGT
AATTATCCAT TGCCAGAAAT ATGGGTTGAG CCAGGTCGTA GTATTGTAGG TGATGCTGGC
ACGACACTTT ATACAGTTGG ATCTGTGAAA GACATTCCTG GTATTCGGAA ATATGTATCA
GTGGATGGTG GGATGACTGA TAATTTAAGA CCTGCTTTAT ATAACGCTCG TTATGAAGCA
ATGTTAGCAA ATCGAGGAAA TGATGAGAAT GAGGAGACTG TTTCGATTGC AGGCAAATGT
TGTGAGAGTG GAGATATGTT AATTTGGGAT ATTACCTTAC CGAAAGTCGC CTCTGCCGAT
TTACTAGCGA TTTCTTGTAC AGGGGCATAC GGGTACTCGA TGGCGAATAA TTATAATCGG
ATTCGTAGAC CAGCTGTCGT CTTCGTGAAA GGCGGTACAT CACAAATTGT TGTAGAGCGC
GAAACATATG AAAATATTAT TGGGAACGAT CGCATACGTA TTAAAGAACT TGTTTAA
|
|---|
| Protein sequence | MYLHGTSRIN GQGHLEIGGC DTTQLAKQYG TPLYVYDEES IRGKCRAFHR AFKESGFSYQ
VAYASKAFLC MEMCRVAREE NMSLDVVSGG ELYTALQAGF PASRIHFHGN NKTEEEIVMA
LQANIGCFVV DNFLELEILH DLAVQHGKFV NILIRVTPGV EAHTHEYITT GQDDSKFGFG
VSNGQAMQAI ELALQKSNYN VLGIHSHIGS QIFETAGFVR AIEVLHQFLE ELRERTNYVV
KVLNVGGGFG IRYTESDTPL TLETYVRAVT SAVREQFTVC NYPLPEIWVE PGRSIVGDAG
TTLYTVGSVK DIPGIRKYVS VDGGMTDNLR PALYNARYEA MLANRGNDEN EETVSIAGKC
CESGDMLIWD ITLPKVASAD LLAISCTGAY GYSMANNYNR IRRPAVVFVK GGTSQIVVER
ETYENIIGND RIRIKELV
|
|---|
| |