Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK0011 |
Symbol | pdx1 |
ID | 3022020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 18518 |
End bp | 19405 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637544166 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_081629 |
Protein GI | 52145199 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000135608 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG TAACAGGGAC AGAACGTGTA AAACGTGGAA TGGCAGAAAT GCAAAAAGGC GGCGTTATTA TGGACGTAAT TAACGCTGAA CAAGCAAAAA TTGCAGAAGA GGCAGGCGCG GTTGCCGTTA TGGCATTAGA GCGTGTACCA GCAGATATTC GTGCAGCAGG TGGCGTTTCT CGTATGGCAG ACCCAACAAT CGTTGAAGAA GTTATGGGTG CTGTGTCAAT TCCGGTTATG GCAAAATGCC GTATCGGTCA CCTTGTAGAA GCACGTGTAT TAGAATCATT AGGGGTAGAC TATATCGATG AGAGTGAAGT ATTAACTCCT GCCGATGAAG TATACCATTT AAATAAACGT GATTACACAG TTCCGTTCGT ATGTGGTTGC CGTGATATCG GAGAAGCTGC ACGTCGTATT GCAGAAGGTG CATCTATGCT TCGTACAAAA GGTGAACCAG GAACAGGAAA CATTGTAGAG GCAGTGCGTC ATATGCGTCA AGTCAATGCA GAAATCCGTC AAGTTGCAAG TCTACGTGAA GATGAGTTAA TGACATATGC AAAAAATACC GGTGCTCCTT ATGAAGTACT ACTTGAAATT AAACGTCTTG GTCGTTTGCC GGTTGTAAAC TTTGCAGCAG GTGGTGTAGC AACACCAGCA GATGCAGCGT TAATGATGCA ATTAGGTGCG GATGGTGTAT TTGTTGGATC TGGTATTTTT AAATCAGAGA ACCCAGCGAA ATTTGCACGT GCAATCGTTG AAGCGACAAC TCATTATGAG GATTACGAAC TAATTGCAAG CCTTTCAAAA GGATTAGGTA ATGCAATGAA AGGTATCGAA ATTTCAACGT TACTACCAGA GCAACGCATG CAAGAGCGTG GATGGTAA
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Protein sequence | MTNVTGTERV KRGMAEMQKG GVIMDVINAE QAKIAEEAGA VAVMALERVP ADIRAAGGVS RMADPTIVEE VMGAVSIPVM AKCRIGHLVE ARVLESLGVD YIDESEVLTP ADEVYHLNKR DYTVPFVCGC RDIGEAARRI AEGASMLRTK GEPGTGNIVE AVRHMRQVNA EIRQVASLRE DELMTYAKNT GAPYEVLLEI KRLGRLPVVN FAAGGVATPA DAALMMQLGA DGVFVGSGIF KSENPAKFAR AIVEATTHYE DYELIASLSK GLGNAMKGIE ISTLLPEQRM QERGW
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