| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfl058 |
|---|
| Symbol | |
|---|
| ID | 2897872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mesoplasma florum L1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006055 |
|---|
| Strand | + |
|---|
| Start bp | 73663 |
|---|
| End bp | 75510 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637520087 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_053298 |
|---|
| Protein GI | 50364873 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 156 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA TAATTAAAGA AATTAATAAA CCAACTTTAG TTCTTGCACA TAACAAAACT
TTAGCTATGC AATTGTATTA TGAGTTGATG GAATTCTTTC CTAATAATAG AGTTGAGTAT
TTTGTTTCAA ATTTCGACTT CTTTCAACCT GAAGCATATA AGCCTGCGAC TGATTTATAT
ATTAATAAAG ATGCCAGAAT TAATATGGAA CTTGATATGT TGAGAATGAG CGCTATGAAT
GCATTATCAA TTTCTAATGA CACAATAGTA GTTGCATCTG TTGCCGCAAT ATATCCATCA
CAAGATCCTG TTCAATATGC ATCAAGTTTT TTTGAATTGA AAACTGGGCA AAAATTTTCT
AAAAGAGAAT TATTAACATA TTTAGTTAAA ACAGGATATA CAAGAAACGA CATTGAAAAT
TCACCAGGTA CTTTTAGTGT AAAAGGTGAT GTTATAAAAG TAGTTCCAGG ATGATCTTTA
TCAGCTATGT ATCGTTTTTC ATTATTTGAT GATCATATAG AAATGATAGA CATGTTAAAT
GTTGTAACGG GGGCTTTAAT TGAAAGAATC TCAACTGTTA CAATATATCC TGCTCAAGCT
TATGTGACAC CTGAAGATAA GTTAAAACAA GCTTGCTTGA ACATAAGAGA AGAACTTGCG
GTTAGAGTTA AAGAATTAAA AGAAGAAGGA AAACTATTAG AAGCAGAAAG ATTAGATCAA
AGAACAAGAT ATGATTTAGA AAGTTTAGAA GAGTTTGGAT TTTGTAGTGG TATTGAAAAT
TATTCTGCAC ACTTAGATTT TAGAGCGCCA GGAGAGACCC CATATACTTT ATTAGATTAT
TTTAAAGGAG ATTTTTTAAC TATAATTGAT GAATCACACA TAATGGTTTC TCAAGTTAGA
GGTATGTATA ATACTGATAG AAGTAGAAAA CAAACTCTTG TAGAGTATGG TTTTAGATTG
CCTTCAGCAT TAGATAATAG ACCTTTAAAT TTTGAAGAAT TTACAGGAAA ATTAAAACAA
GTAATTTATA CATCAGCTAC ACCAGGTGAT TATGAATTAG AACTTGTTAA TCATGAAGTT
GTTGAACAAA TTATTAGACC AACGGGTTTA TTAGATCCAG TAATCGAAGT TAAAAAAACA
GAAGGTCAAA TAGAAGATAT AATTGAACAA ATTCATGAAA GAAAAAAAGT AAATGAAAAG
GTATTTATTA CAACTTTAAC AATTAGAATG AGTGAAGATT TAACAAGTTA CTTACAAGAA
AGAAATATTA AAGTAGCATA TTTACATTCA GAATTAAAAA CACTTGAAAG AAGCGATATT
TTAAATGATC TTAGAAGAGG CGTTTATGAT GCTGTTGTTG GAGTTAACTT ATTACGTGAA
GGGTTGGATT TACCTGAAGT GAGTTTAGTT TGTGTTCTAG ATGCAGATAA ACAAGGTTTT
TTAAGAAATA CAAAATCACT AATTCAAACA GCTGGTAGAG CTGCTAGAAA TGCTAATGGT
AAAGTTATTT TTTATGCAGA TACAATTTCA ACATCAATGC AAGAAGCTAT GGATGAAACA
AATCGTAGAC GAGAAATTCA ACAAGCTTAC AATAAAGAAC ATAATATAAC TCCAGTAACT
ATAACAAAGA AAATCAATCA ATCAACTTTA AGTGAAGCAA CTAAAAAAGA ACTTGAAAAA
ATTAAAAAAC AAAAAACTGC AAAAGGCAAA AAAGAAGCTT ATCAAAAAAC AATTGATGAT
ATTAGAGCTG AAATGATTCA AGCAGCAAAG GATTTAGATT TTGAAAAAGC AGCAGTTTTA
AGAGATACAA TAATTGAACT AGAAGCTAAG AAAAGTGAGG TAAAATAA
|
|---|
| Protein sequence | MANIIKEINK PTLVLAHNKT LAMQLYYELM EFFPNNRVEY FVSNFDFFQP EAYKPATDLY
INKDARINME LDMLRMSAMN ALSISNDTIV VASVAAIYPS QDPVQYASSF FELKTGQKFS
KRELLTYLVK TGYTRNDIEN SPGTFSVKGD VIKVVPGWSL SAMYRFSLFD DHIEMIDMLN
VVTGALIERI STVTIYPAQA YVTPEDKLKQ ACLNIREELA VRVKELKEEG KLLEAERLDQ
RTRYDLESLE EFGFCSGIEN YSAHLDFRAP GETPYTLLDY FKGDFLTIID ESHIMVSQVR
GMYNTDRSRK QTLVEYGFRL PSALDNRPLN FEEFTGKLKQ VIYTSATPGD YELELVNHEV
VEQIIRPTGL LDPVIEVKKT EGQIEDIIEQ IHERKKVNEK VFITTLTIRM SEDLTSYLQE
RNIKVAYLHS ELKTLERSDI LNDLRRGVYD AVVGVNLLRE GLDLPEVSLV CVLDADKQGF
LRNTKSLIQT AGRAARNANG KVIFYADTIS TSMQEAMDET NRRREIQQAY NKEHNITPVT
ITKKINQSTL SEATKKELEK IKKQKTAKGK KEAYQKTIDD IRAEMIQAAK DLDFEKAAVL
RDTIIELEAK KSEVK
|
|---|
| |