| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_5077 |
|---|
| Symbol | |
|---|
| ID | 2857398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 5138306 |
|---|
| End bp | 5139127 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637516513 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | YP_039387 |
|---|
| Protein GI | 49480440 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000000000418838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATA AAATGATTGT TTTAGATTTA GATGATACGT TATTACGTGA TGACCATACT
ATTTCACCTC GTACGAAAGA AGCTCTAATG ACTGCGCAAG AGCAAGGAGT AAAGGTGGTA
CTTGCTTCCG GACGTCCAAC ATTCGGTATG CGCAATGTAG CGAAAGAACT TCGTTTAGAA
GAATACGGTA GTTTCATTCT ATCTTTTAAT GGCGCAAAAA TTATTAACTG TAAAACAAAT
GAAGAAATCT TTAGTAGTAC GCTTTCTCCT GAAATCGTTC ACAATCTATT TGAAATTAGT
AAAACTGAAG GTGTATGGAT TCACACTTAT ATTGGCGATG ATATCGTAAC AGAAGAAAAT
AATCCTTATA CTGAAATTGA GGGCGATATT ACTGGTATGC CAATTGTTGT AGTAGATGAC
TTTAAAGCTG CTGTTAAAGA GCCTGTAGTA AAAGTATTAA TGAATAAAGA AGCTGAACGC
CTTGTTGAAG TAGAAAAGAA ACTACAAAAA CAACTAGAAG GACAATTAAG CGTTATGCGT
TCTAAACCAT TCTTCTTAGA ATTTACTGAA GCTGGTGTTA CAAAAGGAAC GAGCTTAAAC
CAATTAATCC AAAAGCTTGG CATTAAGCGT GAAGAAGTTA TCGCAATGGG CGATAGCTAT
AACGATCAGG CGATGATTGA ATTTGCTGGT CTTGGTGTTG CAATGGGCAA TGCACCTGAT
GATATTAAGG AAATTGCAAA CTATGTAACA GATACAAATA TGAACGATGG CGTTGCAAAA
GTTGTAGAGA AGTTCGTACT AAAAAGAGAA GCGCTTGTTT AA
|
|---|
| Protein sequence | MTYKMIVLDL DDTLLRDDHT ISPRTKEALM TAQEQGVKVV LASGRPTFGM RNVAKELRLE
EYGSFILSFN GAKIINCKTN EEIFSSTLSP EIVHNLFEIS KTEGVWIHTY IGDDIVTEEN
NPYTEIEGDI TGMPIVVVDD FKAAVKEPVV KVLMNKEAER LVEVEKKLQK QLEGQLSVMR
SKPFFLEFTE AGVTKGTSLN QLIQKLGIKR EEVIAMGDSY NDQAMIEFAG LGVAMGNAPD
DIKEIANYVT DTNMNDGVAK VVEKFVLKRE ALV
|
|---|
| |