| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4919 |
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| Symbol | opuD |
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| ID | 2858863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 4972910 |
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| End bp | 4974427 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637516354 |
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| Product | glycine betaine transporter |
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| Protein accession | YP_039228 |
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| Protein GI | 49481222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAC TGACAAAAAC ATTCATCGTT TCATTAACAT TATGTATTGC ATTTACACTT
TGGGGGATTA TTCCCGAATC TATTATTGGA AAAGGTAGCC TAGGAAATGT AACAACCGCA
ATTCAAACTG CATTAGTTAG TAAGTTTGGA TGGTTCTATA TTATTTCTGT TTCTATTATT
TTAGGTGTGT CTATCTTTTT AATTGTTTCG AAATACGGTT CTATTCGTTT AGGTAAAGAT
GATGACGAGC CTGATTATAG TTATATGACA TGGTTTGCTA TGTTATTTAG TGCTGGTATG
GGTATCGGCT TAGTCTTCTG GGGCGTTGCG GAACCATTAA ACCATTTGTA TGCACCTCCG
TTTGGAGAGA GTGCAACTGA GGAAAGTGCA CGTCTTGCAC TGCGTTTTTC ATTTTTCCAT
TGGGGATTAC ATCCTTGGGG ACTATATGCA TTTGTAGCGC TTTGTATTGC TTACTTTACT
TTTAGAAAAG GAAAAGCAAG TACAATTAGT GCGACAGTAG GACCGTTATT TAAAGGCGGG
GACCATGGAC GTATTGCTCA TTTATTTGAT GTGTTAGCTG TTTTCGCGAC TGTGTTTGGC
GTGGCAACAT CATTAGGTCT TGGTGCAAAA CAAATTGCCG GTGGTGTTAG TTATTTAACA
TCCATCCCGA ATTCATTAAC GACTCAGTTA GTTATTATTG CAATCGTAAC AGTGTTATTT
ATGTTATCTG CGCAAACAGG TCTTGATAAA GGAATTAAAT ATTTAAGTAA TACGAATATT
ATTTTGGCAT TTGCACTTAT GATTATTGTA TTATTTGCGG GTCCAACAAA CTTTATTATG
AATTACTTCA CCTCAACGAT TGGTGCTTAC ATTCAGGAAT TGCCAAGCAT GAGTTTCCGA
TTAAGTCCAT TAGATGAAGG TGGAAACCAA TGGATTCAAT CGTGGACAAT TTTCTATTGG
GCATGGTGGA TTGCATGGTC ACCATTCGTA GGTACATTTA TTGCTCGTGT TTCACGAGGA
CGTACCATTC GTGAGTTTGT TATCGGTGTG TTACTCGTAC CGACCGTAAT TGGTGCCCTT
TGGTTCTCTG TTTTCGGCGG AACTGGTATT CATATGGAGC TGTTCGGTGA TGCACATATT
TTTGAAAAAG TGAAAGAGAT GGGAACAGAA GTAGGGTTAT TCGCTATGTT TGACCAGATG
GGAAGCTTTG GATCGGCTTT ATCTGTTCTA GCTATTCTTC TTATTTCTAC ATTCTTTATT
ACATCTGCAG ATTCAGCGAC ATTCGTTTTA GGAATGTTAA CAACACATGG TAGTTTAAAT
CCGCCAAACC GCATTAAAAT GATCTGGGGT ATCGTTTTAG CAGCCTTAGC TTCTATCTTA
TTATATGTAG GTGGCTTAGA GGCCTTACAA ACGGCAGCTA TCATTGCAGC ATTCCCATTC
GTTTTTGTTA TTTTCTTTAT GATGGCAGCC TTATTTAAAG AGTTACAAAA AGAAGGACGT
ATGAAGCGTC ATAAATAA
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| Protein sequence | MRKLTKTFIV SLTLCIAFTL WGIIPESIIG KGSLGNVTTA IQTALVSKFG WFYIISVSII
LGVSIFLIVS KYGSIRLGKD DDEPDYSYMT WFAMLFSAGM GIGLVFWGVA EPLNHLYAPP
FGESATEESA RLALRFSFFH WGLHPWGLYA FVALCIAYFT FRKGKASTIS ATVGPLFKGG
DHGRIAHLFD VLAVFATVFG VATSLGLGAK QIAGGVSYLT SIPNSLTTQL VIIAIVTVLF
MLSAQTGLDK GIKYLSNTNI ILAFALMIIV LFAGPTNFIM NYFTSTIGAY IQELPSMSFR
LSPLDEGGNQ WIQSWTIFYW AWWIAWSPFV GTFIARVSRG RTIREFVIGV LLVPTVIGAL
WFSVFGGTGI HMELFGDAHI FEKVKEMGTE VGLFAMFDQM GSFGSALSVL AILLISTFFI
TSADSATFVL GMLTTHGSLN PPNRIKMIWG IVLAALASIL LYVGGLEALQ TAAIIAAFPF
VFVIFFMMAA LFKELQKEGR MKRHK
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