| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4682 |
|---|
| Symbol | lipA |
|---|
| ID | 2858540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4735074 |
|---|
| End bp | 4735970 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637516117 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_038992 |
|---|
| Protein GI | 49481035 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0000492626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC AAACAGAATA TAAGCGCAAG CCCGAATGGT TGAAAATTAA GTTAAACACG
AATGAAAACT ATACAGGCTT AAAGAAAATG ATGCGTTCTA AGAATCTTCA TACAGTTTGT
GAAGAAGCGA AATGTCCGAA TATTCATGAA TGCTGGGCTG TAAGAAAAAC AGCAACATTT
ATGATTTTAG GAGCAGTATG TACACGTGCT TGTCGTTTCT GTGCGGTTAA AACAGGCTTA
CCAACAGAGC TTGATTTACA AGAGCCAGAA CGCGTAGCAG ATTCTGTAGT ACAAATGGGC
TTAAAGCACG TTGTTATAAC AGCGGTTGCA CGTGATGATT TAAAAGACGG GGGAGCAGCT
GTTTTTGCTG AAACAGTACG CGCTGTTCGT CGCAAAAATC CATTTACGTC AATTGAAGTA
TTACCATCTG ATATGGGTGG AGTAGAAGAA AACTTAAAAA TGTTAATGGA TGCAAAACCA
GATATTTTAA ACCATAACAT TGAAACAGTA CGTCGATTAT CTAACCGAGT TCGCGCTAGA
GCAAAATATG ACCGTTCATT AGAGTTTTTA CGTCGAGCGA AAGAAATGCA GCCTGATATT
CCAACTAAAT CGAGCATTAT GGTCGGCTTA GGGGAAACGA GAGAAGATTT AATTGAAGCA
ATGGATGACC TACGTGCAAA CAATGTGGAT ATTTTAACTC TTGGACAATA CCTACAACCA
TCTAAGAAGC ATTTACCAGT TCTTAAATAT TATCCACCAG CAGAATTTGC AGAGCTTAAA
GAAATTGCAC TTAGCAAAGG CTTTAGCCAC TGTGAAGCTG GCCCACTTGT GCGTTCTTCT
TACCATGCGG ACGAGCAAGT TCGTTCTGCA AAAGAAAAAA CAGCAGAAGC AAAATAA
|
|---|
| Protein sequence | MTKQTEYKRK PEWLKIKLNT NENYTGLKKM MRSKNLHTVC EEAKCPNIHE CWAVRKTATF
MILGAVCTRA CRFCAVKTGL PTELDLQEPE RVADSVVQMG LKHVVITAVA RDDLKDGGAA
VFAETVRAVR RKNPFTSIEV LPSDMGGVEE NLKMLMDAKP DILNHNIETV RRLSNRVRAR
AKYDRSLEFL RRAKEMQPDI PTKSSIMVGL GETREDLIEA MDDLRANNVD ILTLGQYLQP
SKKHLPVLKY YPPAEFAELK EIALSKGFSH CEAGPLVRSS YHADEQVRSA KEKTAEAK
|
|---|
| |