| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4592 |
|---|
| Symbol | cspD |
|---|
| ID | 2853683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4640326 |
|---|
| End bp | 4640526 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637516004 |
|---|
| Product | cold shock protein |
|---|
| Protein accession | YP_038904 |
|---|
| Protein GI | 49478797 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00000000000232551 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG GTAAAGTTAA ATGGTTTAAC AGCGAAAAAG GTTTCGGTTT CATCGAAGTT
GAAGGTGGAG ACGATGTATT CGTTCACTTC TCAGCTATTC AAGGTGACGG ATTCAAAACT
TTAGAAGAAG GTCAAGAAGT TTCTTTCGAA ATCGTTGAAG GTAACCGTGG ACCACAAGCT
GCTAACGTTA CAAAAAACTA A
|
|---|
| Protein sequence | MQTGKVKWFN SEKGFGFIEV EGGDDVFVHF SAIQGDGFKT LEEGQEVSFE IVEGNRGPQA
ANVTKN
|
|---|
| |