| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4295 |
|---|
| Symbol | spoU |
|---|
| ID | 2854468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4362531 |
|---|
| End bp | 4363295 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637515710 |
|---|
| Product | 23S rRNA methyltransferase |
|---|
| Protein accession | YP_038610 |
|---|
| Protein GI | 49478690 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 76 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TTGATTCAGT ACAAAATCCG CGTGTGAAGC AGTGGAAAAA GCTGCAAACG
AAAAAAGAAC GCGATAAAAA AGGTTTATTT TTTGTAGAAG GATTCCATTT AGTGGAGGAA
GCTTTAAAAG CAGGAGTTGT AACAGAACTT ATCGTTTCAG ATCAGACAGA CCTTCCGAAA
GATTGGACAG TTAATGATGT AGAAATGTAT ATCGTACCGG AAGTAATCGT AAAAGTACTT
CGTGAAACAG AAACGACGCA AGGTGTATTT GCTGTTTGTG AGAAACACGA GAGTGAAGTA
GCTCTTACTG ATGGGAAGTT TCTTTTATTA GATGGCTTGC AAGACCCAGG TAACTTAGGG
ACAATTATTC GCACAGCTGA TGCAGCTGGT ATTCATGCCG TTGTGCTTGG AGAAGGTTGT
GTTGATGCAT ATAATAGTAA AGTACTCCGC TCTACACAAG GCTCTATTTT CCACTTACCA
ATTGTAAAAG GAAACTTAGA AGAATGGGTA GACAAACTAA AAGAAAATAA CGTTCCTGTA
TATGGAACAG CTCTTGAAAA TGGAGTTCCT TACGGTGAAG TAACACCAGC AGGAAGTTTT
GCATTAATTG TAGGAAATGA AGGAAACGGC GTACGCCAAG AAATTCTTGC AAAAACAGAT
CAAAACTTGT ATATTCCGAT TTATGGCGGG GCAGAATCAT TAAATGTTGC AGTTGCAGCA
GGGATTTTAA CGTATTATTT ACAAAGCCCA GTTGCGAACA AATAA
|
|---|
| Protein sequence | MKNIDSVQNP RVKQWKKLQT KKERDKKGLF FVEGFHLVEE ALKAGVVTEL IVSDQTDLPK
DWTVNDVEMY IVPEVIVKVL RETETTQGVF AVCEKHESEV ALTDGKFLLL DGLQDPGNLG
TIIRTADAAG IHAVVLGEGC VDAYNSKVLR STQGSIFHLP IVKGNLEEWV DKLKENNVPV
YGTALENGVP YGEVTPAGSF ALIVGNEGNG VRQEILAKTD QNLYIPIYGG AESLNVAVAA
GILTYYLQSP VANK
|
|---|
| |