Gene BT9727_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4284 
Symbol 
ID2855191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4349036 
End bp4349725 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID637515699 
Productpseudouridylate synthase 
Protein accessionYP_038599 
Protein GI49478685 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA ACCAATACAT AAGCGAAGCA AAATCCTGTT CAAGACGTGA AACAGATCGC 
CTTATTAAAG CCGGGCGCGT AGCGATTAAC GGCGAAATAT GTACGCACGG TGCACTTGTT
AATGAAGGTG ATGTTGTAAC GATTGATGGA CAGGTTATTG CAAAAGAAGA GAAAGAAAAG
GTGTATATTG CCTTTCATAA ACCAGTTGGG ATTACCTGCA CAGCAGCTGA GCATATTGAA
GGTAATATTA TTGATTATAT TAATTACCCA GAGCGTATCT TTCCTGTTGG ACGATTAGAT
AAAGCATCAG AAGGACTTAT TTTATTAACG AATGACGGCG GGATTGCCAA TCAAATTTTA
CACGGTGATC ATGAGCACGA GAAAGAATAT GTTGTTACAG TTGATAAACC TTTTACAGAT
TGGTTTATGA ATGAGATGTC CAGCGGTGTA AAGATTAAAG ATGGAATGAC GAAGCCATGT
AAAGTGACGA GAGTGGATCA GTCTACGTTT CGCATCGTTT TAACGCAAGG AATGAACAGA
CAAATTCGTA GAATGAGCCG AGCTTTCGGG TTTACTGTAA TAAAGTTAAA GCGAGAACGC
ATTATGAATA TAGAGCTAAA TGATCTTGAA GTAGGAAAGT GGCGAGACAT TACAACTGAA
GAATTAGAAT TATTAATAGG ACAGTTATAG
 
Protein sequence
MKINQYISEA KSCSRRETDR LIKAGRVAIN GEICTHGALV NEGDVVTIDG QVIAKEEKEK 
VYIAFHKPVG ITCTAAEHIE GNIIDYINYP ERIFPVGRLD KASEGLILLT NDGGIANQIL
HGDHEHEKEY VVTVDKPFTD WFMNEMSSGV KIKDGMTKPC KVTRVDQSTF RIVLTQGMNR
QIRRMSRAFG FTVIKLKRER IMNIELNDLE VGKWRDITTE ELELLIGQL