Gene BT9727_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4070 
SymbolaroE 
ID2855841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4133688 
End bp4134521 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID637515487 
Productshikimate 5-dehydrogenase 
Protein accessionYP_038388 
Protein GI49481393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.000710125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT TATATGGTGT AATCGGAAAT CCAATTGGAC ATTCATTATC ACCCGTTATG 
CATAACGATG CATTTGAACA CTTGAATATG GATGCCCATT ACCATGCCTT TCTTGTTAAA
GAGGAAGTGT TAGGGGAAGC AGTAAGAGGT TTAAAAGCGT TAGGTATTTC AGGATTTAAT
GTAACAACTC CGCACAAGGT TGCGATTATG GATTATTTGG ATGAGATTGA CCCGCTAGCA
AAACAAATTG GTGCAGTAAA TACGGTGGTT CATAAGGATG GAAAATTGAT TGGCTACAAT
ACAGATGGAA TTGGTTTTGT CCGAGCACTG CAATCCATTA GTAGTGAACC ACTTCAAGAG
AAACGTATTT TATTACTTGG CGCAGGCGGT GCTAGTCGAG CTATTTATTT TTCACTTGCT
GATGCAGGGG TGAAAGAGAT TGATGTAGCT AATCGTACAG TAGATAAGGC GAAAGAACTT
ATTGCTGCAT GTACGGCTAC TGTTCATTCT GTTGCTTTAT CATTAGAAAA AGCAACAAAA
GAACAAGGGA GTTATGATAT TATCATTCAG ACGACAACGA TAGGTATGCA TCCACGCGTC
GAACATACGC CGTTACAAAT TTCTTCGTTG AAAAAGGGAA CAATTGTATC AGATATAATT
TATAATCCAT TTGAAACGAA AATTTTATGT GAGGCGAAAG AGCAAGGTGC AATCATTCAA
AATGGTATTG ATATGTTTGT TTATCAAGGA GCGCTTGCAT TTGAAATGTG GACAGGTTGC
GTACCGAATA TCGAACGAAT GAAACAATTA GTTATAAGAA AGCTTGGAGG CTAA
 
Protein sequence
MKQLYGVIGN PIGHSLSPVM HNDAFEHLNM DAHYHAFLVK EEVLGEAVRG LKALGISGFN 
VTTPHKVAIM DYLDEIDPLA KQIGAVNTVV HKDGKLIGYN TDGIGFVRAL QSISSEPLQE
KRILLLGAGG ASRAIYFSLA DAGVKEIDVA NRTVDKAKEL IAACTATVHS VALSLEKATK
EQGSYDIIIQ TTTIGMHPRV EHTPLQISSL KKGTIVSDII YNPFETKILC EAKEQGAIIQ
NGIDMFVYQG ALAFEMWTGC VPNIERMKQL VIRKLGG