Gene BT9727_3919 details

Gene Information

• Locus tag: BT9727_3919
• Symbol: dxs
• ID: 2857775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 4001483
• End bp: 4003375
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637515336
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_038238
• Protein GI: 49480923
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000317792
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATCTAA CGCAAATTCA AAACCCTAGT TTTTTGAAAG ATATGTCTAT CAGTGAACTA 
GAGGGATTGA GTGAGGATAT TCGTAAGTTT TTAATTGAAG AGCTCTCTCA AACAGGTGGA 
CATATTGCAC CTAATTTAGG TGTAGTAGAA CTCACAATTG CTCTGCATAA ATTATTTGAT 
AGTCCGAAAG ATAAATTTTT ATGGGACGTA GGACATCAAT CCTATGTACA TAAAATTTTA 
ACTGGACGTG CAAAAGAATT CGGCACATTA AGGCAATATC AAGGTCTATG TGGTTTCCCA 
AAACGTTGCG AGAGTGAGCA CGATGTATGG GAAACTGGCC ATAGCTCGAC ATCATTATCT 
GCTGCAATGG GAATGGCTCT AGCACGTGAT TTAAAGAAAA CGAAAGAATA TGTTATACCA 
ATCATTGGTG ATGGTGCTTT AACAGGCGGA ATGGCTTTAG AGGCATTGAA CCATATTGGA 
CATGAAAAAA CAGACATGAT TGTTATTTTG AATGATAATG AAATGTCAAT TGCGCCAAAC 
GTTGGTGCGC TTCATAATGT GCTTGGGCGT CTACGTACCG CAGGAAAATA CCATTGGGTA 
AAAGACGAAC TAGAGTATAT ATTGAAGAAA ATCCCAGCAG TTGGCGGGAA AGTTGCTGCG 
ACAGCAGAGA AAATAAAAGA TAGTCTTAAA TATTTATTAG TATCCGGTGT CTTTTTCGAA 
GAGTTAGGCT TTACATATTT AGGTCCAGTT GATGGGCATG ACTATGAAAA GTTATTCGAA 
ACGTTGCAAT ATGCAAAGAA AACAAAAGGC CCAGTGCTTG TTCATGTTAT TACGAAAAAA 
GGAAAAGGTT ACAAACCAGC CGAGAGTGAT GTTATTGGCA CTTGGCATGG GACAGGACCT 
TATAAAATTG AATCAGGTGA CTTCGTTAAA CCGAAAGAAG TTGCACCAGC ATGGAGTGCT 
GTCGTTAGTG AAACAGTACT TAAGCTAGCA AGAACGGACG AGCGTATCGT AGCAATTACA 
CCTGCGATGC CTGTTGGATC AAAACTTGAG AAATTCCAAA AAGAATTCCC GGATCGTATG 
ATTGATGTAG GTATTGCAGA ACAGCATGCT ACAACAATGG CAGCGGGTAT GGCAACGCAA 
GGTATGAAGC CATTCTTAGC AATTTATTCA ACATTTTTAC AAAGAGCATA TGACCAAGTT 
GTTCATGATA TATGCCGCCA AAATTTAAAT GTTTTCATTG GGATCGATCG CTCTGGTTTA 
GTAGGAGCAG ATGGTGAAAC GCATCAAGGT GTATTTGACA TCTCATTCTT ACGCCACTTG 
CCGAATATGG TAATTATGAT GCCAAAAGAT GAAAATGAAG GGCAACATTT AGTATATACG 
GCGATGCAAT ATGAAGATGG ACCAATCGCA TTACGATATG CGCGCGGTAA TGGACTTGGC 
GTTCATATGG ATGAAGAATT AAAGGCGATT CCAATTGGTT CATGGGAAAC GTTAAAAGAA 
GGTACACAAG CAGCTATTTT AACATTTGGT ACGACAATAC CAATGGCAAT GGAAGCGGCT 
GAGCGTCTTG AAAAGGCTGG AGTTTCAGTG AAAGTAGTGA ACGCTCGCTT TATTAAACCG 
ATGGATGAAG CATATTTACA TGATCTCTTA GGAAAGAATA TACCAATTTT AACGATTGAA 
GAAGCTTGTT TAATCGGTGG TTTTGGAACA GGAGTAGTTG AATTTGCGTC TGAGAACGGG 
TACCATAGTG CGTTAGTTGA ACGAATGGGT ATTCCAGATC GTTTCATAGA GCACGGTAGT 
GTAACAAAAT TATTAGAAGA AATTGGTTTA ACGACAGATG CTGTTGTAGA CCGTATTCAT 
ACAATGATTC CATCAAAACA AAAAAGGGCG TAA 

 

Protein sequence

MDLTQIQNPS FLKDMSISEL EGLSEDIRKF LIEELSQTGG HIAPNLGVVE LTIALHKLFD 
SPKDKFLWDV GHQSYVHKIL TGRAKEFGTL RQYQGLCGFP KRCESEHDVW ETGHSSTSLS 
AAMGMALARD LKKTKEYVIP IIGDGALTGG MALEALNHIG HEKTDMIVIL NDNEMSIAPN 
VGALHNVLGR LRTAGKYHWV KDELEYILKK IPAVGGKVAA TAEKIKDSLK YLLVSGVFFE 
ELGFTYLGPV DGHDYEKLFE TLQYAKKTKG PVLVHVITKK GKGYKPAESD VIGTWHGTGP 
YKIESGDFVK PKEVAPAWSA VVSETVLKLA RTDERIVAIT PAMPVGSKLE KFQKEFPDRM 
IDVGIAEQHA TTMAAGMATQ GMKPFLAIYS TFLQRAYDQV VHDICRQNLN VFIGIDRSGL 
VGADGETHQG VFDISFLRHL PNMVIMMPKD ENEGQHLVYT AMQYEDGPIA LRYARGNGLG 
VHMDEELKAI PIGSWETLKE GTQAAILTFG TTIPMAMEAA ERLEKAGVSV KVVNARFIKP 
MDEAYLHDLL GKNIPILTIE EACLIGGFGT GVVEFASENG YHSALVERMG IPDRFIEHGS 
VTKLLEEIGL TTDAVVDRIH TMIPSKQKRA