| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3863 |
|---|
| Symbol | nhaC |
|---|
| ID | 2856695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 3947259 |
|---|
| End bp | 3948632 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637515280 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_038182 |
|---|
| Protein GI | 49478540 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCAA AAATTGAATC TGTTCTTTTA ACAATTTTTA TCTTTTTCTG TATTGGCTTT
AGTGTTATCA AATTAGAAGT TTCACCACAC ATCCCGATTT TATTTGGTAT CGTTCTTTTA
TTAGCATTTG GATTTATGAA AAAAATTGAT TGGTCTACTA TGGAAAAAGG AATGATAAGT
AGTATTTCAG CTGGTATTCC GTCTATTTTT ATTTTCTTAC TTGTAGGCGT ATTAATTAGT
GTTTGGATCG CCGCTGGAAC AATTCCAACT TTAATGGTAT ACGGCTTCCA GCTTGTATCT
CCTAAAATTT TCATTCCAAC TGTTTTTGTT GTTTGTGCAA TTGTTGGAAC AAGTATCGGT
AGTGCTTTTA CAACTGCTGC TACTGTAGGA CTTGCCTTTA TGGGTATGGG TAGTGCTCTC
GGATACGATC CAGCTCTAAT CGCTGGTGCA ATTATTTCTG GTGCATTCTT TGGAGATAAA
ATGTCTCCTT TATCTGATAC AACAAACTTA GCGCCAGCTG TAACAGGTGT AGATTTATTT
GAGCACATTC GCAACATGCT TTGGACAACA GTTCCAGCTT TCATTATTGC TTTTATCGCA
TTTTTCATTT TAGGAAGCGG TACTAGTGGA GATGTTGACT TCACAAACTT CATTAGCACA
TTAGAGAAAA ATGCAACGAT TTCTATCTTT ACACTTATTC CAATTTTATT ACTGTTCCTA
TTCGCATTTA AGAAGGTACC CGCAGTTCCA ACATTACTTG CTGGAATTAT AGTAGGGATC
ATTATCCTCT TTATATTTAA ACCTAGTACT TCTTTAACTG ATTTAATGAA AATTATGCAA
GACGGTTACG TTTCTAAAAC TGGTATCAAA GATATTGATA GCTTATTATC TCGCGGTGGC
CTGCAAAGTA TGATGATGTC AATCGCTCTT ATTTTCCTAG CTCTTTGTAT GGGAGGATTA
TTACAAGGGA TGGGTATTAT CACGAAGCTA ATGAATATCA TCTCTAGCTT CGTAAAAACT
AGCACACGCT TAATCATCTC TACTGCCTCA ACTGCAATCG GTGTAAACTT CTTACTTGGT
GAGCAGTACT TATCTATCGT CTTAACAGGA CAAGCATTTG CTAATAAATA CGATGAAGTC
GGTTTAGAAC GTCGTAATTT ATCACGTGTA TTAGAAGACG CAGGTACAGT TATTAACCCC
CTCGTACCGT GGGGAGTAAG TGGTGTATTC TTATCGAACG TCCTTGGTGT TCCAACATTT
GATTACGTTC CATTCGCAAT CTTCTGCTTA GCTTGTCCAA TCGTAACAAT TATTGTTGGT
TTCACTGGAT TTGGTCTTTC ATGGAAGAAA GAAAAGGCAG TAACAATTTC ATAA
|
|---|
| Protein sequence | MVSKIESVLL TIFIFFCIGF SVIKLEVSPH IPILFGIVLL LAFGFMKKID WSTMEKGMIS
SISAGIPSIF IFLLVGVLIS VWIAAGTIPT LMVYGFQLVS PKIFIPTVFV VCAIVGTSIG
SAFTTAATVG LAFMGMGSAL GYDPALIAGA IISGAFFGDK MSPLSDTTNL APAVTGVDLF
EHIRNMLWTT VPAFIIAFIA FFILGSGTSG DVDFTNFIST LEKNATISIF TLIPILLLFL
FAFKKVPAVP TLLAGIIVGI IILFIFKPST SLTDLMKIMQ DGYVSKTGIK DIDSLLSRGG
LQSMMMSIAL IFLALCMGGL LQGMGIITKL MNIISSFVKT STRLIISTAS TAIGVNFLLG
EQYLSIVLTG QAFANKYDEV GLERRNLSRV LEDAGTVINP LVPWGVSGVF LSNVLGVPTF
DYVPFAIFCL ACPIVTIIVG FTGFGLSWKK EKAVTIS
|
|---|
| |