| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3830 |
|---|
| Symbol | xerD |
|---|
| ID | 2856349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3919430 |
|---|
| End bp | 3920320 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637515247 |
|---|
| Product | site-specific tyrosine recombinase XerD |
|---|
| Protein accession | YP_038149 |
|---|
| Protein GI | 49480325 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGATC AATTAAAAGA TTTTATTCAT TATATGGTTG TCGAAAAAGG GCTAGCGAAA
AATACAGTAG TATCTTATGA ACGTGATTTG AAAAGTTATG TAAAGTATTT GCAAAAGGTA
GAACAAGCGA AAAGCTTTCA CGAAGTGACA CGCTTGCACA TTGTTAATTT TCTGCAACAC
TTAAAAGAAA ACGGAAAATC TTCGAAAACA TTAGCACGTC ATATTGCATC GATTCGTTCG
TTTCATCAAT TTTTACTTCG TGAACGAGCA GTAGAGCACG ATCCATCCGT ACATATTGAA
ACGCCGCAAG GAGAACGGAA ATTACCGAAA GTATTGTCAG TTGATGAAGT AGAGGCGTTA
CTTCAGACAC CAAAAATGAC GAGTGCTTTT GGGGTTCGTG ATAAAGCGAT GCTAGAGTTA
CTGTATGCAA CAGGACTTCG TGTTTCAGAA TTAATTGCAT TAAATTTAGA AGATGTACAT
TTAACGATGG GATTTGTTCG TTGCGTAGGG AAAGGGAATA AAGAAAGAAT TATTCCACTA
GGAAGCTTAG CGACGGAAGC GATTCAAAAG TATATTGAAA AGGGAAGAAG AGAATTGATG
GGAAAAAAAG TAGTAGATGC ACTCTTTTTA AACCATCATG GAAATCGATT ATCAAGACAA
GGATTTTGGA AGATTTTAAA ACGATTAGCG AAAGAAGCAA ATATTGAAAA AGAGCTTACA
CCTCATACGT TGCGCCATTC TTTTGCAACG CATTTATTAG AAAATGGAGC AGACTTGCGT
GCTGTGCAAG AAATGCTTGG GCATGCAGAT ATTTCAACGA CACAAATTTA TACGCATGTT
TCAAAAACTA GATTAAAAGA TGTATATAAA CAGTTTCATC CGAGAGCATA G
|
|---|
| Protein sequence | MEDQLKDFIH YMVVEKGLAK NTVVSYERDL KSYVKYLQKV EQAKSFHEVT RLHIVNFLQH
LKENGKSSKT LARHIASIRS FHQFLLRERA VEHDPSVHIE TPQGERKLPK VLSVDEVEAL
LQTPKMTSAF GVRDKAMLEL LYATGLRVSE LIALNLEDVH LTMGFVRCVG KGNKERIIPL
GSLATEAIQK YIEKGRRELM GKKVVDALFL NHHGNRLSRQ GFWKILKRLA KEANIEKELT
PHTLRHSFAT HLLENGADLR AVQEMLGHAD ISTTQIYTHV SKTRLKDVYK QFHPRA
|
|---|
| |