Gene BT9727_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_3347 
SymbollytR 
ID2854624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand- 
Start bp3425858 
End bp3426895 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content33% 
IMG OID637514767 
Producttranscriptional regulator LytR, attenuator for lytABC and lytR expression 
Protein accessionYP_037669 
Protein GI49478970 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000000255205 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATA ACTCTTCTTC AAGAGAAAGG AAATATAGAC GAAAATATAA AAAGACAACG 
ATAATAAGTT CACTACTAGC GGTATTACTA TTTGGTGGAG TTGGATATGG TGCTTATGTA 
TATATGAAAA CTTCTAATCT CGTACAAAAG TCAAATGTTA ATTTAGCACG TGGTGAAAAA 
TCAAATTTAC GTGAGGAAAC TGTTAAACCG ATCACCAATA ATGTTTCACT TTTAATTATG 
GGAATAGATG AAAATAAAGA ACGACAAAAA GAGTATAATG GTGCATTTCA TACAGATGCG 
CTACTGTTAG CTACTTTTAA TAAAGACGAT AAAACAGTGA AACTAACGAG CATACCACGT 
GATACATACA CATATGTTCC GGTTGAAAAG AAAAAAGATA AAATAACGCA TGCATATGGA 
AGTGGTTTCG TTAAAAATGG TAAAGATGGA GGACCGCAAG CTGCAGTGGA AGCGGTAGAA 
AAATTATTAC AAGTGCCTGT TGATTATTTT GTGAAGTTTA ATTTTAATTC ATTTACTAAA 
ATTATTGATG GGTTAGATGG GATTGAAGTA GATGTTCCAG TTGAATTTAC GGAGCAAAAT 
AGTAAAGATG AACCTGATGC GATTCATTTG AAAAAAGGAC TACAAAAATT AAATGGGGAA 
GAAGCACTTG CTCTAGCAAG AACGCGTCAT ATTGATAGTG ATGCAATGAG AGGGCAGCGG 
CAACAACTTG TTATGGAAGC GATTTTAAGT AAATTAAAAA GTGTAGGATC AATTACGAAC 
CTAGAAAAAA TAGTTGAGGC GGTTGACGGT GATTTTAAAA CAAATTTAGC AATGGATGAT 
ATTTTATCTT TTTATAAATA CGGTTTAAAT TGTTCGGTTG AAAAAATTCA ATTAGCAGGT 
GATGATTTAT ACTTACCTAA TGGCCCAAAC GGCCAACGTG TATATTATTA TAATCCTAAT 
AAAAAAGATT TACAGAGTTT GAGTAATACT CTTAGGACAC ATCTAGGATT AAGTGAAAAG 
GAGATTGAGG AAAATTGA
 
Protein sequence
MENNSSSRER KYRRKYKKTT IISSLLAVLL FGGVGYGAYV YMKTSNLVQK SNVNLARGEK 
SNLREETVKP ITNNVSLLIM GIDENKERQK EYNGAFHTDA LLLATFNKDD KTVKLTSIPR 
DTYTYVPVEK KKDKITHAYG SGFVKNGKDG GPQAAVEAVE KLLQVPVDYF VKFNFNSFTK 
IIDGLDGIEV DVPVEFTEQN SKDEPDAIHL KKGLQKLNGE EALALARTRH IDSDAMRGQR 
QQLVMEAILS KLKSVGSITN LEKIVEAVDG DFKTNLAMDD ILSFYKYGLN CSVEKIQLAG 
DDLYLPNGPN GQRVYYYNPN KKDLQSLSNT LRTHLGLSEK EIEEN