Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_3344 |
Symbol | oppA |
ID | 2858636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 3420253 |
End bp | 3421959 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637514764 |
Product | ABC transporter, substrate-binding protein |
Protein accession | YP_037666 |
Protein GI | 49479250 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.331453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AGATGAAAAA GTTCACGGCG GTTGTGGCGC CAGTTTTAGC GATGAGTATG GCGTTGACAG CTTGTTCTGG ATCTGGTGGG GAGAAGAAAT CAACTACGAC GTCTAGTGGT GGTGGGGAAG AGAAAAAGTC TGAAATTAAA TACGCAGCAA AACAAGTGTT AAATCGTACA GAGAATCAAG AGATTCCGAC GATGGATGTT TCAAAATCTA CTGATACATT AGGTTCTCAA ATTTTAGGGA ACACGATGGA AGGTTTATAT CGATTAGATA AAGATAATAA GCCAATCCCA GCTGCAGCAG AATCTAGTAC GAAAAGCGAG GATGGCAAAA AATATACATT TAAATTACGT AAAGATGCAA AATGGTCAAA TGGTGATCCT GTAACAGCGA AAGATTTCGT ATACGCATGG CAGCGCTTAC TTGATAAAAA TACAGCTGCA GAATATGCGT TTATTGCCTT CTATATTAAA AACGCAGAAG CAATTAATAA AGGTGAAAAG CCACTAACAG ATTTAGGAGC AAAAGCGGTA GATGATTATA CGCTAGAAGT AGAATTAGAG AAACCAGTAC CATATTTCTT GAATTTAATG GCATTCCCAT CTTACTATCC ATTAAATGAA AAGTTCGTAA AAGAAAAAGG AGATAAATTC GGTTTAGAAG CAGATACAAC GTTGTATAAC GGACCGTTCG TTATGGCTTC ATGGAAACAT GAACAAGGAT GGCAGCTAAA GAAAAATGAT AAGTACTGGG ATAATAAGAC TGTAAAATTA GAAGAAATTA ACTATAGTGT AGTAAAAGAA GTTGCGACGA AAGTAAACTT ATATGATACA GGATCAATTG ATTTCACACT ATTATCAGGG GAATTCGTTG ATAAATATAA ATCGAATAAA GAAGAGTATG GTGAATATTC AGAAGCAAGT ACATTCTTCT TACGTTTAAA TCAAAAACGT AATGGACAAG ATACACCGTT AAAGAGCAAA AAACTTCGTG AAGCGATTGC ATTATCAATT GATAAAAAAG GATTAGCAAA CGTTATTTTA AATAACGGTT CAAAAGCAAC AGATCAATTA GTACCAAAAG GACTTGCGAC AGGACCAGAC GGTAAAGATT ACCAAGATAC ATTTAAAAAC GGTCTAAAAT ATGATCCGAA AAAAGGTGCA GCAGCTTGGG AAGCAGCGAA AAAAGAACTT GGTAAAGATC AAGTGACAAT TGAATTACTA AGCTATGATG ATGGAACTGC GAAAAAAATT GCTGACTACT TTAAAGATCA AATTGAGAAA AACTTAAAAG GTGTAACGGT TAACACGAAA ATTCAACCGT TCAAACAAAA ACTAAAATTA GAGTCAGCAC AAGATTATGA AGTTTCGTTT GCAGGTTGGA GTCCAGATTA TTCGGATCCA ATGACATTTA TTGATATGTT TGAATCGAAG AGCCCATATA ACCAAATGAG TTATTCGAAT CCAAAATATG ATGAAATGGT AGCGAAAGCA GGTAATGAAT TACTGTCTGA TCCGAAGAAG CGTTGGGAAA CGTTAGGAAA AGCAGAGAAA TTATTCCTTG AAGAAGATGC AGGATTAGTT CCTTTATATC AAACAGGAAG AGCGTATGTA ATGAAACCGA ATGTAAAAGG AATTGTGAAA CATAACATTA GTCCAGAATA TAGCTTTAAG TGGGCTTATG TAACGGAAGG TAAATAA
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Protein sequence | MKKKMKKFTA VVAPVLAMSM ALTACSGSGG EKKSTTTSSG GGEEKKSEIK YAAKQVLNRT ENQEIPTMDV SKSTDTLGSQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR KDAKWSNGDP VTAKDFVYAW QRLLDKNTAA EYAFIAFYIK NAEAINKGEK PLTDLGAKAV DDYTLEVELE KPVPYFLNLM AFPSYYPLNE KFVKEKGDKF GLEADTTLYN GPFVMASWKH EQGWQLKKND KYWDNKTVKL EEINYSVVKE VATKVNLYDT GSIDFTLLSG EFVDKYKSNK EEYGEYSEAS TFFLRLNQKR NGQDTPLKSK KLREAIALSI DKKGLANVIL NNGSKATDQL VPKGLATGPD GKDYQDTFKN GLKYDPKKGA AAWEAAKKEL GKDQVTIELL SYDDGTAKKI ADYFKDQIEK NLKGVTVNTK IQPFKQKLKL ESAQDYEVSF AGWSPDYSDP MTFIDMFESK SPYNQMSYSN PKYDEMVAKA GNELLSDPKK RWETLGKAEK LFLEEDAGLV PLYQTGRAYV MKPNVKGIVK HNISPEYSFK WAYVTEGK
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