| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3235 |
|---|
| Symbol | |
|---|
| ID | 2856905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3302033 |
|---|
| End bp | 3303232 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637514656 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_037558 |
|---|
| Protein GI | 49481599 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000000154906 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCTCAGTACC ATCACTTTTA TTAATGATTA TTCTTGTCGC ATTTCCGCAA
ATTAGTGAAA CGATCTACAC ACCGTCTTTA CCAGACATTT CAAAGGCGTT GCACGTAAGT
AATAATGAGG TACAGTTAAC ACTTAGTGTG TATTTTGCTG GATTTGCTTT CGGTGTATTT
TTTATTGGAT GGCTATCGGA TATAATTGGC CGTCGTCCGG CAATGTTATT TGGAATTGTT
GTATATGGCA TTGGGAGTTT CTTATGCTTT ATTGCAAATT CCATTGAAGT TTTATTAGTA
AGTCGTTTTA TTCAAGCATT TGGAGCAAGT GCAGGATCAG TTGTGACGCA NACGATTCTT
CGTGAAAGTG TAGAAGGGCA TAAGAGGCAT GTTATGTTTG CTCAAATCTC GGCAGTCATT
GCTTTTACAC CAGCGATAGG GCCATTAATT GGTGGATTTC TTGATCAAAT GTTTGGATTT
AAAATAGTAT TTTTAAGTTT AGTAGTTATG AGTGTCGGAA TTTTTCTGTA TACGTTTGTT
TCTCTTCCAG AAACAAAAAC GAGCTCAGTA ACAAATAAAA TAAATGTTTT TTCAGTATTG
AAAAGATTAA TTACAAATCC GAAAGTAGTA ACATATGGGC TATTAATTGG AGGTGCAAAT
GGTGTTTTAT TTAGCTATTA TGCAGAAGCA CCGTTTATCT TTATTGAATA CTTTCGATTA
TCGCCTAGTA TGTATGGATT TTTAGGAATT GTTGTTGCTT CTGCTTCTAT TATTGGAGCG
AAAGTTTCAA AACGATTGCT TGCAACTTAT AAACCAGAGA AAATTATATA TATCGGTTGT
CTTGTAATGG TAGTTGGAGC AGTCGCTTTA TCTCTTATTA CTTCAGTTGG ATCAAATCCA
AACATAATAT ATATGGTCGG ATTTTTAGTA GCGATGTTTA TATTGCTATT AGGAATTGGA
GTAGCATTAC CTAACTGTTT AAGTTTAGCA TTAGTAGATT TTCAAGATGT CATTGGTACA
GCGGGTGCAT TGTTTAGCCT AGGGTACTAT GTAATTGTAA CGATAACAAT TTGGGGAATG
AGTCAACTTC ATACGGGCTC GTTACTGGTG ATGCCACTTT ATTTTCTAGC TATAGTAGTT
ATCATGATGG TGTTTACTAA AGTGTTTGTT TTAGGTAAAC AAACTTCAAA AACGATTTAA
|
|---|
| Protein sequence | MKKVSVPSLL LMIILVAFPQ ISETIYTPSL PDISKALHVS NNEVQLTLSV YFAGFAFGVF
FIGWLSDIIG RRPAMLFGIV VYGIGSFLCF IANSIEVLLV SRFIQAFGAS AGSVVTXTIL
RESVEGHKRH VMFAQISAVI AFTPAIGPLI GGFLDQMFGF KIVFLSLVVM SVGIFLYTFV
SLPETKTSSV TNKINVFSVL KRLITNPKVV TYGLLIGGAN GVLFSYYAEA PFIFIEYFRL
SPSMYGFLGI VVASASIIGA KVSKRLLATY KPEKIIYIGC LVMVVGAVAL SLITSVGSNP
NIIYMVGFLV AMFILLLGIG VALPNCLSLA LVDFQDVIGT AGALFSLGYY VIVTITIWGM
SQLHTGSLLV MPLYFLAIVV IMMVFTKVFV LGKQTSKTI
|
|---|
| |