| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3132 |
|---|
| Symbol | |
|---|
| ID | 2857338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3200024 |
|---|
| End bp | 3200734 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637514553 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | YP_037455 |
|---|
| Protein GI | 49478190 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA AAGTTATATT ATTCGACGTA GACGATACAT TATTAGATTT CCCTGAAACG
GAAAAACACG CACTGCATAA TGCGTTTGTA CAGTTCGGTA TGCCTACAGG GTATACTGAT
TATCTTGCAA GTTATAAAGA GATTAGTAAT GGGTTATGGA GAGATTTAGA AAATAAAATG
ATTACGCTAA GTGAATTAGC GGTAGATCGA TTTAGACAAT TGTTTGCACT TCATAATATA
GAAGTAGATG CGCAGCAATT TAGTGACGTA TATCTTGAAA ACTTAGGGAA AGAAGTACAT
CTTATTGAAG GTGCAGTGCA ATTATGTGAG AATCTACAAG ATTGCAAGCT AGGCATCATT
ACGAATGGAT ATACGAAGGT ACAACAATCT AGAATTGGAA ATTCGCCTTT ACGTAACTTC
TTTGAACATA TTATTATTTC TGAAGAGGTT GGCCATCAAA AACCAGCACG TGAGATTTTT
GATTATGCGT TTGAAAAGTT TGGGATTACG GATAAATCAA GTGTACTAAT GGTTGGAGAT
TCGCTCACTT CTGATATGAG GGGCGGAGAA GATTACGGCA TTGATACGTG CTGGTATAAT
CCGAGTTTGA AAGAGAATAA GGCAAGTGTT AAGCCGACTT ATGAAGTGGA GAGCCTGCTG
CAAATTTTAG AACTTGTAGA AGTGGCGGAA GAAAAGGTAG TATCATTTTA A
|
|---|
| Protein sequence | MKYKVILFDV DDTLLDFPET EKHALHNAFV QFGMPTGYTD YLASYKEISN GLWRDLENKM
ITLSELAVDR FRQLFALHNI EVDAQQFSDV YLENLGKEVH LIEGAVQLCE NLQDCKLGII
TNGYTKVQQS RIGNSPLRNF FEHIIISEEV GHQKPAREIF DYAFEKFGIT DKSSVLMVGD
SLTSDMRGGE DYGIDTCWYN PSLKENKASV KPTYEVESLL QILELVEVAE EKVVSF
|
|---|
| |