| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2314 |
|---|
| Symbol | |
|---|
| ID | 2858024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2405747 |
|---|
| End bp | 2408485 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637513738 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_036640 |
|---|
| Protein GI | 49477748 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.6229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCAT TGCGTAAACA TTCACATGTG CAATTTTATG TATTGATATT GGCTTTAGTA
GCTTATTTAA GCTTTTGCTT TATATTTTTA TTTGTTTTTC CAAATCTTTA TTTTGTATCA
GATTTTAATA TACGACTCTC ATCTTTAGTT GTTGAAACTA TTGTACTTAT TTCATTAATC
TATTCTATAG TATCTAGAAA AGTTAAGTTA GGATTGTTTT GGACTTGTAT TACTATTGCA
ATAGGGTGTT TCTTGATAGG GAATTTTATA TCTGCTTTTC AAGTACTTAA TATAGAATTA
CCAATACAAA ATTTTAATAT CTCTGATGTA TTTTTGTTGT TTTTCTTATT CTTCTTTCTC
TTTGCGTTCT TTTATAAAAT CATGATGGAA TGTAACAAAT GGGAAAAAGC GTATTTAATT
TGTGATTTAT GTATTGTTGT TACTGCTATT TTTACATTAG AGTGGTACCT ATTTAATAAA
CCTTCTGCAA ATATCTTATT CTTTTCAATT GGAGATGTTT TTCTTTCATT TATTTTTCCG
ATTATAGATT TATTGCTTCT ATTACTTGGA GTTACACTAA TCTTTCGACC TGCTATTTTC
AATGCAAAAA GTAAATTGTT TATTTTTATC CTAGTATTAA CTGGATTTGC TATTACGGAC
TACTTATATT TTTACTTACA AGATGATTTG TCAGATCGTT CAGTTATATT ATTAAGGTGT
TTGTATAGAG TTTTTCTATT ATTTATCGCT ATTGCTGCGA CTATCCCAAG GAGTGTATCT
TCTAAAAGAG ATTATTTTAT TATTAATCCG ACATTTGGAA AGAAACTTCT TGTCATATTT
CCTTATCTTG CAGTTGTAAT CTTAATTGGT TTTACTTTGA AAGAGCAAAC TTCTTCATCT
ACACTGATTA CGGGTAATTG TATTGCCTTT GTATTTGTAC TGATTCGTCA TACAATTGTA
CGAATGCAAA ACAAAGATTT AACCGAAACA TTAAAAGTGT TTAATAGTCA ATTAGAACAA
AAAGTATCTC AAAGAACAGC AGATTTAATA ACCAAATCCA ATGATTTGGT TATTAATCAA
GAGAGATTTA AGTCCTTATA TGAGTATCAT CCAGATCCTA TTTTAACGAT TGATTCAAAT
GGTACTGTGT TAAATATAAA CCAGGCTGGA AGTATGTTAT TAGGGAAAAA CAGTGGCGAA
TTAATAGGTA AAGAATGCTT TTCAATTTTT TTAGATGAAG ATAGATCTGA ATTGGAAGCA
GCTCTACAGG AAGGAAAACG ATGTAGTTCG ACTTCGTTAC AATTACGGGT GAAAAACAAT
AATGAGAAGG ACATTCATTT TTGGTGCGTG ACCATTGTTC CTATTATGAT AGAAGGACAA
ACTTTTGGGA GTTATGTAAT GGTAAAAGAC ATTACGAGAA TGAAGCAACA ACAAGATAAG
ATAAACTATC TAGCATTCCA TGATACAGTG ACGGAGATTG GAAATCGAAT ATTCTTCCAA
CAAGAATTAG AAAAATCCAT TGAGCGTGCA CAAAAAACGC AGGGTGAATT TGGACTCTTA
TATATAGATT TAAATCGTTT CAAGACCATT AATGATACAA TGGGACATTC AATCGGTGAT
AGTGTTTTAA AAGAAGTTGC TAAACGTTTT AGGACATGTC TGTCACCGTC TATTTCTCTA
GCGAGAATAG GGGGAGATGA GTTTGCAGTC TTAGTCCATA ACCACACAGA ACACCAGCTA
ATGAATTTAT GTGAAACTCT GTTTCGTATA ACTGAGGAAC CATTTGTAGT AAATCAGCAT
AGTTTTTACT TATCTCTTAG TATAGGAATA GCGATGTATC CGTTTGGAGG AATAAACACT
ACTACACTTT TACAACATGC TGATATCGCC ATGTATAGCG CAAAGGAAAA AGGTAACAAT
GCTGTTTGTA TGTACGACGA GACATTATCT CAAAAAATAA CAAGACGATT ACAATTAGAA
CAGGATTTAC CGAATGCAAT TGAAAATAAT GAGTTGTTTT TATTATATCA ACCACAAGTT
GATAGTAAGG CAGGTAAGGT TATTGGTGCA GAGGCTTTAA TACGTTGGCA ACATCCAGAG
CTTGGGCTAA TTTCACCTTT TGAGTTTATA CCTATCGCGG AAGAAACATC GCAGATTATT
TCAATTGGGA AATGGACGTT ACAGGAAGCG TGTCGGCAAC TGAAAGAATG GCATTCTGCA
GGCTATTCAA ATTTAAAGAT GGGGATAAAT TTATCAGCTA TAGAGTTTGA ACAGAAGGGC
TTTGTTCAAA CAGTCATATC TATTATAGAA GAAGTAGGGG TACCAGCTAA CTCGATTGAT
TTGGAATTAA CAGAGCGTAT TGCCATGGTA GATGAAAAAG AAACTTTATC GAAGTTAAAA
GCATTAAAAT CATATGGTGT ACATTTATCA ATTGATGATT TTGGTACAGG CTATTCTTCA
TTAGCGTATT TACCTTTGTA TCCAATTGAT ACTTTGAAAA TTCCAAGAGA ATTTGTAAAT
AGGATTGGAA CTTCAAATGA TGGAGATGAA ATTATACAAA CTATTATTTC GTTAGCCCAT
ACTTTAAATA TGAAAGTAAT AGCAGAAGGG GTAGAAACGA AGGAGCAATT AACAGTGTTA
CAACAAAATG CATGTTATCT AATTCAAGGT TATTACTACA GTAAGCCTGC AAATGAAGAT
GCATTTATTA ATTTTTTAAA CACGACACAT AACAAATAA
|
|---|
| Protein sequence | MIPLRKHSHV QFYVLILALV AYLSFCFIFL FVFPNLYFVS DFNIRLSSLV VETIVLISLI
YSIVSRKVKL GLFWTCITIA IGCFLIGNFI SAFQVLNIEL PIQNFNISDV FLLFFLFFFL
FAFFYKIMME CNKWEKAYLI CDLCIVVTAI FTLEWYLFNK PSANILFFSI GDVFLSFIFP
IIDLLLLLLG VTLIFRPAIF NAKSKLFIFI LVLTGFAITD YLYFYLQDDL SDRSVILLRC
LYRVFLLFIA IAATIPRSVS SKRDYFIINP TFGKKLLVIF PYLAVVILIG FTLKEQTSSS
TLITGNCIAF VFVLIRHTIV RMQNKDLTET LKVFNSQLEQ KVSQRTADLI TKSNDLVINQ
ERFKSLYEYH PDPILTIDSN GTVLNINQAG SMLLGKNSGE LIGKECFSIF LDEDRSELEA
ALQEGKRCSS TSLQLRVKNN NEKDIHFWCV TIVPIMIEGQ TFGSYVMVKD ITRMKQQQDK
INYLAFHDTV TEIGNRIFFQ QELEKSIERA QKTQGEFGLL YIDLNRFKTI NDTMGHSIGD
SVLKEVAKRF RTCLSPSISL ARIGGDEFAV LVHNHTEHQL MNLCETLFRI TEEPFVVNQH
SFYLSLSIGI AMYPFGGINT TTLLQHADIA MYSAKEKGNN AVCMYDETLS QKITRRLQLE
QDLPNAIENN ELFLLYQPQV DSKAGKVIGA EALIRWQHPE LGLISPFEFI PIAEETSQII
SIGKWTLQEA CRQLKEWHSA GYSNLKMGIN LSAIEFEQKG FVQTVISIIE EVGVPANSID
LELTERIAMV DEKETLSKLK ALKSYGVHLS IDDFGTGYSS LAYLPLYPID TLKIPREFVN
RIGTSNDGDE IIQTIISLAH TLNMKVIAEG VETKEQLTVL QQNACYLIQG YYYSKPANED
AFINFLNTTH NK
|
|---|
| |