Gene BT9727_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_2287 
SymbolrpoD 
ID2855811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp2371141 
End bp2371680 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content31% 
IMG OID637513711 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_036613 
Protein GI49479242 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00000136578 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATGG AACAGACATT TATTGAAAAG TGTAATCATG AAGAGCTGGA CGATGTTATA 
AAAGACTATT GGCAAGATGT ATGGAATTAT TCATTTATTA TTACGAAAGA TCCACACTTA
TCAGATGATA TTACGCAAGA TGTATTTATA AAGGTATTTA AAAATTGGAA TTCATTTCGA
AAGGAGTCAT CTATTAAAAC GTGGATATTA AAAATCACAA GAAATACGGC AATAAACTAT
TTGAAATCAT CTTATTTTAA AAGAATATCT TTAGTAGGAT TTTTTAGTGA CGACAAGCAA
ACTGTGTCGG CAGAACAAGA GTTTTTTAAG CAAGAAGAAA TGAATGATGT TTGGAAAGTT
GTATTAAAAC TACCTAAAAA GCACCGTGAA ATAATAATAT TGGACGCAAA ATATGAATTA
TCTTATGAAG AAATGGCTGA AACACTAGGA GTATCCATTG GAACTGTAAA ATCTAGATTA
AGTAGAGCAA GAAGTAAGGT TTCAAAACTA ATAGGGGAGG GTGGTAGTGA TGAACAATAA
 
Protein sequence
MEMEQTFIEK CNHEELDDVI KDYWQDVWNY SFIITKDPHL SDDITQDVFI KVFKNWNSFR 
KESSIKTWIL KITRNTAINY LKSSYFKRIS LVGFFSDDKQ TVSAEQEFFK QEEMNDVWKV
VLKLPKKHRE IIILDAKYEL SYEEMAETLG VSIGTVKSRL SRARSKVSKL IGEGGSDEQ