| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2273 |
|---|
| Symbol | |
|---|
| ID | 2853897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2356258 |
|---|
| End bp | 2357511 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637513697 |
|---|
| Product | permease; macrolide-efflux protein |
|---|
| Protein accession | YP_036599 |
|---|
| Protein GI | 49477719 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00046211 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTATGA TATCTATTAG TATAAAACCT TCGATGCAAG ATTTTTATTT AATGGTTAGT
GGGCAAATTA TTACTATTTT GGGTTCAACA CTTTTACGTT TTGCTCTGTC ATTATATGTG
CTAGATTTAA CAGGGCGTGC TGATATATTC GCAGGATTAT ATGCGATAAC GAGTATTCCG
TTTTTGCTAG CTCCTCTTGG CGGAGCGATA GCAGATCGTT TCAATCGCCG TAATTTAATG
GTTATTTTTG ATTTCATAAA TACTGCGATT GTATTAAGCT TTATAGTTTT GTTATTTACT
GGATCTGTAT CTATTCTATT GATTGGAACA ATTATGTTTT TACTAGCAAT CGTTAATGCA
ATGTACGCAC CAGTTGTAAT GGCAAGTATT CCGCAATTAG TTCCAGAGAA AAAGTTAGAA
CAAGCGAACG GTATCGTAAA TGGTGTGCAA GCATTATCTA ATATAGTTGC CCCTGTATTA
GGAGGAATAT TGTACGGCAT AATTGGTTTG AAAATACTCG TGATAATAAG TTGTCTTGCT
TTCTTTTTAT CTGCGATTTT AGAAATGTTT ATTACAATAC CTTTTATAAA GAGAGTACAA
GAAAGCCATA TCATACCGAC AATTGTAAGG GATATGAAAA GGGGATTTAT ATATGTTTTA
AAACAATCAT TTATTTTGAA ATCTATGCTT TTAGCCGCAT TACTAAATTT AATACTAACG
CCGCTATTTG TTGTTGGTGC TCCAATTATT ATACGAGTAA CAATGGAAAG TAGCCACACG
TTATATGGAA TTGGAATGGG ATTGATCGAT TTTGCTACTA TTATAGGTGC ATTATCAATA
GGTTTTTTTG CGAAAAAGCT ACAGATGCAA ACATTGTATT ATTGGATGAT TTTAATAGCT
TTATTAGTAA TACCGATGGC ACTATCAGTT ACACCAGTTA TTCTTAATTT AGGATACTAT
CCACCATTTA TCCTCTTTAT ACTTTCTTCT ATTTTAATTG CAATGATTAT GACAGTTGTA
TCCATCTATG TGATTACTGT AGTCCAAAAG AAAACACCAA ATGAAAACTT AGGAAAAGTA
ATGGCAATTA TAACAGCAGT ATCCCAATGT ACGGCACCGA TTGGGCAAGT CGTATATGGT
TTTATGTTTG AAAAATTCAG CATGAAAATT TATTTACCGA TATTAGCTAT TAGTTTCATA
ATGATATTAT TAGCGGTTGT GACGAAGAAA ATATTATCGA ATGAAGGGAA CTAG
|
|---|
| Protein sequence | MIMISISIKP SMQDFYLMVS GQIITILGST LLRFALSLYV LDLTGRADIF AGLYAITSIP
FLLAPLGGAI ADRFNRRNLM VIFDFINTAI VLSFIVLLFT GSVSILLIGT IMFLLAIVNA
MYAPVVMASI PQLVPEKKLE QANGIVNGVQ ALSNIVAPVL GGILYGIIGL KILVIISCLA
FFLSAILEMF ITIPFIKRVQ ESHIIPTIVR DMKRGFIYVL KQSFILKSML LAALLNLILT
PLFVVGAPII IRVTMESSHT LYGIGMGLID FATIIGALSI GFFAKKLQMQ TLYYWMILIA
LLVIPMALSV TPVILNLGYY PPFILFILSS ILIAMIMTVV SIYVITVVQK KTPNENLGKV
MAIITAVSQC TAPIGQVVYG FMFEKFSMKI YLPILAISFI MILLAVVTKK ILSNEGN
|
|---|
| |