| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2248 |
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| Symbol | rpoE |
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| ID | 2857169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | + |
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| Start bp | 2334161 |
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| End bp | 2335030 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637513672 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_036574 |
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| Protein GI | 49477707 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.00552813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGG AGCAATTATA TGAAGTGTAT CAACCATTAC TATTTTCGTT AGCATATAGA
ATCCTTGGGA GTGTTATGGA TGCTGAGGAT ATCGTTCAGG ATGTATTTAT CTCATTAAAT
AATATAGAAG ATTTTCAGTC TATAGAAAAT ATGAAAGCGT ATTTGTGTAA GATGGCGACA
AATCGTTCAA TTGATAAATT ACGTTCGGCA GCGTATAAAC GTAACGTGTA CGTAGGGATG
TGGTTGCCAG AGCCACTAGT AGAAGAAAGT GATGAGCCAT CAGAGTCATT TGCAATGAAA
GAATCTCTTT CCACCGCATA TTTATTACTT TTACAACAAT TGTCTGAGGT AGAAAGAATT
GTTTTCATAT TAAGAGAGGT TTTCAGTTAT GAATACGAAG AAATAGCTTC GATTGTTGAT
AAGAGTAGTG TGAACTGTAG AAAGATTTTT CAACGGGCAC GAAAAAGTAT ATTGGATAAG
CCGAAGCAAT CGACATTAAG TACGAAGAAA ATGGCTGCTT ACGTTGAAAA GTTTGTATCA
TCATTACAGT GTGGGGATGC GCAAGGTATG TTAGAAGTAT TAAAAACAGA TGCTATACTC
AAAGCTGATG GTGGTGGTAA AGTTACGACT GCAATTCATC CGATTTATTC TGCGGATCGA
ATTATACGTT TGTTCTTTGG GGTTGCGCAA CGATTGACAG AAGCGTACAC TGTTGATTTC
AAAATGGTAA ATGGTATGCC AGGAGTTATA GTTACAATAA ATAATAAAAT AACATATGTT
CTTTCGTTCG CATTTGAGGA TGAGAAGATT TCAAACATTT ATATGGTAGT TAATCCTGAA
AAACTTATGC ATTTAAATGT AAAAATATAA
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| Protein sequence | METEQLYEVY QPLLFSLAYR ILGSVMDAED IVQDVFISLN NIEDFQSIEN MKAYLCKMAT
NRSIDKLRSA AYKRNVYVGM WLPEPLVEES DEPSESFAMK ESLSTAYLLL LQQLSEVERI
VFILREVFSY EYEEIASIVD KSSVNCRKIF QRARKSILDK PKQSTLSTKK MAAYVEKFVS
SLQCGDAQGM LEVLKTDAIL KADGGGKVTT AIHPIYSADR IIRLFFGVAQ RLTEAYTVDF
KMVNGMPGVI VTINNKITYV LSFAFEDEKI SNIYMVVNPE KLMHLNVKI
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