| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2000 |
|---|
| Symbol | |
|---|
| ID | 2856898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2086017 |
|---|
| End bp | 2087357 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637513427 |
|---|
| Product | sodium-dependent transporter |
|---|
| Protein accession | YP_036329 |
|---|
| Protein GI | 49477544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000000000556879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CGGAGCAATG GACTTCGAAA TTAGGTTTTA TAATGGCTGC AGCAGGATCA
GCAATTGGAC TAGGTGCAAT ATGGAAGTTT CCTTATATCG CCGGGAAGAG CGGGGGAGGG
GCATTCTTTT TAATCTTTAT ATTATTTACT GTATTAATTG GATTACCACT ACTTATAGCT
GAATTTATGA TTGGACGTAG CACGCAGAAA CAAGCAGTTG GCGCATTTAA AAGTATTGCA
CCAAATACAG GGTGGCACTG GATTGGACGC CTTGGCGTAG GAACGTGTTT TATATTACTT
TCGTTTTATA GTGTTGTAGG TGGATGGGTA TTCATTTATT TATTCAGAGG AGTAACTGGA
CAACTTATTA CACCAGGACA AAATTACGGT TCATTATTTA CTGAAACAAT TGGAAATCCC
GTTTGGGCAA TTATGGGACA TTTCGCTTTT ATGTTCATTA CGATTTGGGT TGTATCAAAA
GGTGTACAAA ACGGAATTGA AAAAGCAAGT AAATATATGT TACCAGCGTT GTTCGTTTTA
TTTGTGGCTC TTATTGTTCG TTCATTAACA CTTGATAATG CGATACAGGG TGTGAAGTTT
TTCTTGCAAC CAGATTTTTC AAAGATTACT TCAGAAAGTA TTTTGTTCGC AATGGGCCAA
TCATTCTTTG CGATTAGTAT CGGGATTTCT ATTATGGTTA CGTATAGTTC CTATTTAAAT
AAAAAAGAAA GTTTACCAAA ATCAGCAATA ACAATTGTTG GATTGAATTT ATTTGTTTCA
TTATTTGCGG GTCTTGCTAT TTTTCCGGCC GTATTTTCAT TAGGAATGGA GCCGACAGAA
GGGCCTGGAT TATTATTTAT CGTATTACCA TCAGTATTTA GTCAAATTCC ATTTGGTGGT
TTTTTCTTAA CAGTATTTCT TGCACTATTT ACATTTGCGA CATTAACATC GGCATTTTCT
TTACTAGAGA CAGTTGTTTC AGCATTAGCA AATGGAGAAC AAGAAAGAAG AACAAAGTTA
TCATGGATGA TCGGTTTCTG CATTTTCTTA GTAGGTATAC CATCAGCTTT ATCATTTGGA
GTATGGAGTG ATATTACGAT TTTCGGAAAG AATATTTTTG ATGCTGTAGA CTTCTTATCT
AGTAATATAT TAATGCCACT TGGTGCACTA TTCATTAGTA TTTTTGTTTC ATTCAAAATG
GAAAAGAAGG TGCTAGAAGC AGAGTTTTTT GTAGGTGGTA ATTATGGAAA GAAAGTATTT
ACTTGTTGGA CGTTTTTACT TCGATTTGTA GCGCCGCTTG CAATAATTAT CGTCTTTTTA
AATGTAATAG GGGTTATTTA A
|
|---|
| Protein sequence | MKQTEQWTSK LGFIMAAAGS AIGLGAIWKF PYIAGKSGGG AFFLIFILFT VLIGLPLLIA
EFMIGRSTQK QAVGAFKSIA PNTGWHWIGR LGVGTCFILL SFYSVVGGWV FIYLFRGVTG
QLITPGQNYG SLFTETIGNP VWAIMGHFAF MFITIWVVSK GVQNGIEKAS KYMLPALFVL
FVALIVRSLT LDNAIQGVKF FLQPDFSKIT SESILFAMGQ SFFAISIGIS IMVTYSSYLN
KKESLPKSAI TIVGLNLFVS LFAGLAIFPA VFSLGMEPTE GPGLLFIVLP SVFSQIPFGG
FFLTVFLALF TFATLTSAFS LLETVVSALA NGEQERRTKL SWMIGFCIFL VGIPSALSFG
VWSDITIFGK NIFDAVDFLS SNILMPLGAL FISIFVSFKM EKKVLEAEFF VGGNYGKKVF
TCWTFLLRFV APLAIIIVFL NVIGVI
|
|---|
| |