Gene BT9727_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_1795 
SymbolpdaA 
ID2854618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp1884198 
End bp1885025 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content38% 
IMG OID637513225 
Productpolysaccharide deacetylase 
Protein accessionYP_036127 
Protein GI49481185 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.532229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTATT TTTATTCACC AGAAGGGTGT GCTCCATATC AATGGGGGCT AGAACGAGAT 
GTTTCGTATG CCTATATGCC ATATAACTTA TTTTATTACG GAGATTATAT AAGAACATTG
CCATACACAT ATATCCCTCA AAGCTATGAA GTACAAATGA AAGCAGATGA ACGTGGATCG
TGGACACCAT TTTCTTGGGT CGAAAAATAT GCGTACGCAT TTTCAGGACC GTACAATAAA
GCGGAAGTCG CACTTACATT TGATGACGGG CCGGATTTAG AATTTACGCC AAAAATATTA
GATAAGTTAA AACAACATAA TGTAAAAGCT ACTTTTTTCT TACTTGGTGA AAACGCAGAA
AAGTTTCCGA ATGTCGTAAA GCGTATTGCG AATGAAGGGC ATGTAATTGG CAATCATACG
TATAGTCATC CAAATTTAGC GAAAGTAAAT GATGCTGAGT ACCGTAATCA AATTATAAAA
ACAGAAGAAA TATTAAATCG TTTAGCTGGG TATGCACCGA AATTTATTCG CCCACCGTAT
GGTGAAATAC TTGAAGATCA ATTGAAGTGG GCAACTGAGC AAAATTTTAT GATTGTACAG
TGGAGTGTTG ACACGGTTGA TTGGAAAGGT GTAAGTGCTG ATACAATTAC AAATAACGTG
TTAGGGAACT CATTTCCTGG TAGTGTCATA CTTCAGCATT CAACTCCAGG TGGGCATTTG
CAAGGGTCCG TAGAGGCGCT AGACAAAATT ATTCCGCAGT TAAAAACGAA AGGGGCGCGT
TTTGTAACAC TTCCAAGTAT GTTCCAGACA TCAAAAGAAA GAAAATGA
 
Protein sequence
MYYFYSPEGC APYQWGLERD VSYAYMPYNL FYYGDYIRTL PYTYIPQSYE VQMKADERGS 
WTPFSWVEKY AYAFSGPYNK AEVALTFDDG PDLEFTPKIL DKLKQHNVKA TFFLLGENAE
KFPNVVKRIA NEGHVIGNHT YSHPNLAKVN DAEYRNQIIK TEEILNRLAG YAPKFIRPPY
GEILEDQLKW ATEQNFMIVQ WSVDTVDWKG VSADTITNNV LGNSFPGSVI LQHSTPGGHL
QGSVEALDKI IPQLKTKGAR FVTLPSMFQT SKERK