| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0207 |
|---|
| Symbol | oppC |
|---|
| ID | 2854564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 227566 |
|---|
| End bp | 228489 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637511588 |
|---|
| Product | oligopeptide ABC transporter, permease |
|---|
| Protein accession | YP_034562 |
|---|
| Protein GI | 49481729 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTG TTACAGCGAT TACAGAGAAA AAAGAAAAAA AGAGAAGGAG AAATGAATCA
TCACCATGGC GACAAGCTCT TAAAAAGATA AAGAAAAATA AGATGGCGCT CGTAGGATTG
TATGCATTAA TTTTTATGTT TTTATTTTGT TTTATCGGTC CATTCTTTTC ACCATATGCA
TCAGGGAAAA TACAAGTTGC GTTAATTAAC AAACCACCTA GTTTTTCTCA TTGGCTCGGT
ACAGACCAAT TAGGAAGAGA TATTTTAACA AGACTGATGC AAGCGGGACG GATTTCATTA
ACAATTGGCT TAGCTTCGAT GGTTTTATCC GTAATATTAG GAGCTGTATT AGGGGCTATT
GCAGGATTTT ATCGTGGTAT TGTTGATAAT ATTATTATGC GTCTTGCTGA TATTTTAATG
TCGATGCCAG GATTACCATT ACTTATTATA ATGGGTGCAA TTTTATCAGA GTGGAAAGTA
CCATCTGATT ATCGCTTGTA TGTCATTATG ATTATTTTAA GTTTAGTAGG TTGGCCAGGG
CTTGCACGCC TTGTAAGGGG GCAAATTTTA TCACTTAGAG AGCAGGCATT TATGCAAGCT
GCTGATGTGC TAGGGATAAA AGATTACCGA AAAATTATAT ATCACTTAAT TCCTAATGTT
TTACCGATAT TAATTGTGGT ATCCACATTA GGCGTTGCAG GTTCTATTTT AGGAGAGTCC
GCACTAAGCT ACTTAGGTCT CGGCGTTGTC CCACCTACAC CATCATGGGG GAATATGATT
AGTGCAGCGA ACTCATTAAT TGATTTTCAA AAGCGCCCAT GGTTATGGAT TCCGCCTGGT
TTTGCAATCT TTATAACAGT TGTATCCATT AATTTACTTG GTGATGCACT TCGTGATGCG
TTAGATCCAA AGATGAGACG GTAG
|
|---|
| Protein sequence | METVTAITEK KEKKRRRNES SPWRQALKKI KKNKMALVGL YALIFMFLFC FIGPFFSPYA
SGKIQVALIN KPPSFSHWLG TDQLGRDILT RLMQAGRISL TIGLASMVLS VILGAVLGAI
AGFYRGIVDN IIMRLADILM SMPGLPLLII MGAILSEWKV PSDYRLYVIM IILSLVGWPG
LARLVRGQIL SLREQAFMQA ADVLGIKDYR KIIYHLIPNV LPILIVVSTL GVAGSILGES
ALSYLGLGVV PPTPSWGNMI SAANSLIDFQ KRPWLWIPPG FAIFITVVSI NLLGDALRDA
LDPKMRR
|
|---|
| |