Gene BT9727_0121 details

Gene Information

• Locus tag: BT9727_0121
• Symbol: rplF
• ID: 2857175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: +
• Start bp: 133746
• End bp: 134285
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637511491
• Product: 50S ribosomal protein L6
• Protein accession: YP_034477
• Protein GI: 49481676
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000000000112924
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA TTGGTAAAAA GATTCTTGAA ATCCCTGCAG GTGTTACTAT TACAGTTGCA 
GAAGACAATA CTGTAACAGT AAAAGGCCCT AAAGGTGAAT TAACTCGTAC TTTCAATGCT 
GATATGCTTA TCAAAATTGA AGAGAATACA TTAACAGTTG AGCGTCCATC TGAACAGAAG 
GAACACCGTG CATTACACGG TACAACTCGT GCTTTAATCG GAAACATGGT TGAAGGTGTA 
ACTGAAGGTT TCGCACGCGG ACTTGAATTA GTCGGTGTTG GTTACCGTGC TCAAAAACAA 
GGTGATAAAC TTGTATTAAG CGTAGGTTAT TCTCATCCAG TAGAAATGAC TCCGGAAGCA 
GGTCTTGAAG TTGAAGTACC TGCACCAACT AAGATCGTAA TCAAAGGTAT CGACAAGCAA 
CGTGTTGGCG AATTTGCTGC TAACATCCGT GCTGTACGTG CTCCTGAGCC TTACAAAGGT 
AAAGGTATTC GTTACGAAGG CGAAGTTGTT CGTCGTAAAG AAGGTAAAAC TGCTAAGTAA 

 

Protein sequence

MSRIGKKILE IPAGVTITVA EDNTVTVKGP KGELTRTFNA DMLIKIEENT LTVERPSEQK 
EHRALHGTTR ALIGNMVEGV TEGFARGLEL VGVGYRAQKQ GDKLVLSVGY SHPVEMTPEA 
GLEVEVPAPT KIVIKGIDKQ RVGEFAANIR AVRAPEPYKG KGIRYEGEVV RRKEGKTAK